Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RNU6-132P-201ENST00000383863 107 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 RNU6-106P-201ENST00000384405 107 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 MIR451A-201ENST00000385059 72 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 RNU6-589P-201ENST00000516485 107 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 RNU6-537P-201ENST00000517277 103 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 RN7SL660P-201ENST00000614852 299 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 MIR7111-201ENST00000619751 72 ntBASIC-0.09□□□□□ -2.42
SRPXP78539 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.1□□□□□ -2.43
SRPXP78539 MIR1302-5-201ENST00000408164 150 ntBASIC-0.1□□□□□ -2.43
SRPXP78539 RNU7-165P-201ENST00000458864 60 ntBASIC-0.1□□□□□ -2.43
SRPXP78539 RNA5SP330-201ENST00000517096 96 ntBASIC-0.1□□□□□ -2.43
SRPXP78539 uc_338.10-201ENST00000621872 182 ntBASIC-0.1□□□□□ -2.43
SRPXP78539 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.11□□□□□ -2.43
SRPXP78539 SNORD113-1-201ENST00000365321 69 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 MIR1197-201ENST00000408818 88 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 RNU2-51P-201ENST00000410708 197 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.11□□□□□ -2.43
SRPXP78539 RNU6-109P-201ENST00000516364 107 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 RNU6-184P-201ENST00000516514 107 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
SRPXP78539 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 RNU6-154P-201ENST00000384306 106 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 AL606753.1-201ENST00000427435 87 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 SNORD4B-201ENST00000459083 72 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 MIR548O2-201ENST00000616090 70 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.12□□□□□ -2.43
SRPXP78539 RNU6-834P-201ENST00000362367 110 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 RNU6-54P-201ENST00000365563 107 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SRPXP78539 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 FGF7P7-201ENST00000514120 227 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 RNU7-61P-201ENST00000515897 61 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 RNU6-719P-201ENST00000516671 104 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 MIR3064-201ENST00000581130 66 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
SRPXP78539 RNU6-519P-201ENST00000410590 108 ntBASIC-0.14□□□□□ -2.43
SRPXP78539 RNU6-887P-201ENST00000410660 100 ntBASIC-0.14□□□□□ -2.43
SRPXP78539 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.14□□□□□ -2.43
SRPXP78539 CR383656.4-201ENST00000546909 122 ntBASIC-0.14□□□□□ -2.43
SRPXP78539 SNORD58A-201ENST00000383875 65 ntBASIC-0.15□□□□□ -2.43
SRPXP78539 MIR652-201ENST00000385278 98 ntBASIC-0.15□□□□□ -2.43
SRPXP78539 RNU6-972P-201ENST00000391208 107 ntBASIC-0.15□□□□□ -2.43
SRPXP78539 RNU6-175P-201ENST00000516896 107 ntBASIC-0.15□□□□□ -2.43
SRPXP78539 RNU6-762P-201ENST00000517107 102 ntBASIC-0.15□□□□□ -2.43
SRPXP78539 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 RNA5SP292-201ENST00000390974 118 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 RNU6-162P-201ENST00000516228 103 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 MIR3140-201ENST00000583685 90 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 AC104996.3-201ENST00000590718 94 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 MIR2909-201ENST00000617113 69 ntBASIC-0.16□□□□□ -2.44
SRPXP78539 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 SNORD114-31-201ENST00000363219 75 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 SNORD114-29-201ENST00000364819 70 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 RNU6-811P-201ENST00000384069 107 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 MIR216B-201ENST00000390186 82 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.17□□□□□ -2.44
SRPXP78539 MIR450A1-201ENST00000362262 91 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 RNA5SP457-201ENST00000363657 124 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 MIR548U-201ENST00000390728 81 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 RNY4P18-201ENST00000391107 89 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 RNU4-61P-201ENST00000411243 107 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 AC026421.1-201ENST00000519101 163 ntBASIC-0.18□□□□□ -2.44
SRPXP78539 MIR148A-201ENST00000362215 68 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 RNU6-766P-201ENST00000362478 107 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 SNORD90-201ENST00000391145 111 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 MIR6779-201ENST00000617283 64 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 AL109933.3-201ENST00000619095 188 ntBASIC-0.19□□□□□ -2.44
SRPXP78539 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 RNU4-32P-201ENST00000363404 141 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 U3.27-201ENST00000391237 200 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 SNORD42B-201ENST00000458893 67 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 MIR6507-201ENST00000613630 70 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 U7.3-201ENST00000616123 62 ntBASIC-0.2□□□□□ -2.44
SRPXP78539 SNORD116-10-201ENST00000363791 102 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 RNU6-406P-201ENST00000516470 107 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 RNU6-789P-201ENST00000517105 102 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
SRPXP78539 SNORA63.2-201ENST00000362603 126 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 AC244250.2-201ENST00000418731 148 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 AC104692.1-201ENST00000472406 90 ntBASIC-0.22□□□□□ -2.44
SRPXP78539 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms