Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-235P-201ENST00000362644 107 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 RNU6-816P-201ENST00000390914 107 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 AC114755.3-201ENST00000481111 251 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 U6.100-201ENST00000636230 99 ntBASIC-0.55□□□□□ -2.5
SIX3O95343 RNU6-957P-201ENST00000363652 99 ntBASIC-0.56□□□□□ -2.5
SIX3O95343 SNORD114-11-201ENST00000363738 75 ntBASIC-0.56□□□□□ -2.5
SIX3O95343 RNU6-811P-201ENST00000384069 107 ntBASIC-0.56□□□□□ -2.5
SIX3O95343 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
SIX3O95343 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.56□□□□□ -2.5
SIX3O95343 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 RNU6-455P-201ENST00000384681 107 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 AC093423.1-201ENST00000440817 142 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 AP000676.1-201ENST00000533307 52 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 AL442128.1-201ENST00000615151 90 ntBASIC-0.57□□□□□ -2.5
SIX3O95343 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.58□□□□□ -2.5
SIX3O95343 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.58□□□□□ -2.5
SIX3O95343 MIR569-201ENST00000385228 96 ntBASIC-0.58□□□□□ -2.5
SIX3O95343 MT-TY-201ENST00000387409 66 ntBASIC-0.58□□□□□ -2.5
SIX3O95343 MIR655-201ENST00000362159 97 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 SNORD101-201ENST00000384027 73 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 MIR216B-201ENST00000390186 82 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 RNA5SP272-201ENST00000516095 111 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 MTND5P18-201ENST00000445624 1801 ntBASIC-0.59□□□□□ -2.5
SIX3O95343 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
SIX3O95343 RNU6-175P-201ENST00000516896 107 ntBASIC-0.6□□□□□ -2.51
SIX3O95343 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 SNORD58C-201ENST00000365223 64 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 RNU6-24P-201ENST00000384440 107 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 MIR652-201ENST00000385278 98 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
SIX3O95343 RNU6-762P-201ENST00000517107 102 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 MIR4432-201ENST00000581823 84 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 AL590491.3-201ENST00000610731 82 ntBASIC-0.61□□□□□ -2.51
SIX3O95343 MIR20A-201ENST00000362279 71 ntBASIC-0.62□□□□□ -2.51
SIX3O95343 MIR539-201ENST00000365690 78 ntBASIC-0.62□□□□□ -2.51
SIX3O95343 RNU6-426P-201ENST00000516464 97 ntBASIC-0.62□□□□□ -2.51
SIX3O95343 AL391099.1-201ENST00000624635 187 ntBASIC-0.62□□□□□ -2.51
SIX3O95343 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.63□□□□□ -2.51
SIX3O95343 RNU6-732P-201ENST00000516033 103 ntBASIC-0.63□□□□□ -2.51
SIX3O95343 MIR1246-201ENST00000636535 73 ntBASIC-0.63□□□□□ -2.51
SIX3O95343 RNU6-664P-201ENST00000362381 107 ntBASIC-0.64□□□□□ -2.51
SIX3O95343 MIR196A1-201ENST00000388006 70 ntBASIC-0.64□□□□□ -2.51
SIX3O95343 RNA5SP66-201ENST00000517178 101 ntBASIC-0.64□□□□□ -2.51
SIX3O95343 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.65□□□□□ -2.51
SIX3O95343 RNU6-886P-201ENST00000384319 105 ntBASIC-0.65□□□□□ -2.51
SIX3O95343 MIR204-201ENST00000385200 110 ntBASIC-0.65□□□□□ -2.51
SIX3O95343 MIR496-201ENST00000385226 102 ntBASIC-0.65□□□□□ -2.51
SIX3O95343 MTND5P41-201ENST00000517498 206 ntBASIC-0.65□□□□□ -2.51
SIX3O95343 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.66□□□□□ -2.52
SIX3O95343 AL353813.1-201ENST00000440700 253 ntBASIC-0.66□□□□□ -2.52
SIX3O95343 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.67□□□□□ -2.52
SIX3O95343 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.67□□□□□ -2.52
SIX3O95343 SNORA40-201ENST00000388090 126 ntBASIC-0.67□□□□□ -2.52
SIX3O95343 RNU6-935P-201ENST00000410371 100 ntBASIC-0.67□□□□□ -2.52
SIX3O95343 MIR4696-201ENST00000581431 70 ntBASIC-0.67□□□□□ -2.52
SIX3O95343 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 SNORD83B-201ENST00000386745 93 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 RNU6-65P-201ENST00000516332 98 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 RNU6-719P-201ENST00000516671 104 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 AC007012.1-201ENST00000567192 175 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 MIR4436A-201ENST00000585278 85 ntBASIC-0.68□□□□□ -2.52
SIX3O95343 AL157777.2-201ENST00000258070 137 ntBASIC-0.69□□□□□ -2.52
SIX3O95343 AC244090.1-201ENST00000441884 93 ntBASIC-0.69□□□□□ -2.52
SIX3O95343 RNA5SP169-201ENST00000517268 117 ntBASIC-0.69□□□□□ -2.52
SIX3O95343 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.69□□□□□ -2.52
SIX3O95343 SNORD114-14-201ENST00000362723 75 ntBASIC-0.7□□□□□ -2.52
SIX3O95343 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.7□□□□□ -2.52
SIX3O95343 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
SIX3O95343 MTND4LP9-201ENST00000427694 174 ntBASIC-0.7□□□□□ -2.52
SIX3O95343 RNU6-772P-201ENST00000516042 105 ntBASIC-0.7□□□□□ -2.52
SIX3O95343 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.71□□□□□ -2.52
SIX3O95343 MIR9-2-201ENST00000384838 87 ntBASIC-0.71□□□□□ -2.52
SIX3O95343 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.71□□□□□ -2.52
SIX3O95343 AC093726.3-201ENST00000637588 150 ntBASIC-0.71□□□□□ -2.52
SIX3O95343 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 MIR451A-201ENST00000385059 72 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 snoU13.13-201ENST00000458842 104 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 MIR4694-201ENST00000578534 80 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 MIR4536-1-201ENST00000583537 88 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 RNU6-86P-201ENST00000606534 107 ntBASIC-0.72□□□□□ -2.52
SIX3O95343 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.73□□□□□ -2.53
SIX3O95343 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.73□□□□□ -2.53
SIX3O95343 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.73□□□□□ -2.53
SIX3O95343 RNU6-880P-201ENST00000384526 107 ntBASIC-0.73□□□□□ -2.53
SIX3O95343 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms