Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MIR7-2-201ENST00000384970 110 ntBASIC-0.31□□□□□ -2.46
AP3D1O14617 MIR451A-201ENST00000385059 72 ntBASIC-0.31□□□□□ -2.46
AP3D1O14617 AC244090.1-201ENST00000441884 93 ntBASIC-0.31□□□□□ -2.46
AP3D1O14617 RNU6-65P-201ENST00000516332 98 ntBASIC-0.31□□□□□ -2.46
AP3D1O14617 MIR4536-1-201ENST00000583537 88 ntBASIC-0.31□□□□□ -2.46
AP3D1O14617 MIR20A-201ENST00000362279 71 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 RNA5SP98-201ENST00000363158 137 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 RNU6-811P-201ENST00000384069 107 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 AC244250.2-201ENST00000418731 148 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 AC103810.7-201ENST00000607821 91 ntBASIC-0.32□□□□□ -2.46
AP3D1O14617 RNU6-834P-201ENST00000362367 110 ntBASIC-0.33□□□□□ -2.46
AP3D1O14617 SNORD49B-201ENST00000365172 72 ntBASIC-0.33□□□□□ -2.46
AP3D1O14617 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.33□□□□□ -2.46
AP3D1O14617 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.33□□□□□ -2.46
AP3D1O14617 MIR652-201ENST00000385278 98 ntBASIC-0.34□□□□□ -2.46
AP3D1O14617 SNORD4B-201ENST00000459083 72 ntBASIC-0.34□□□□□ -2.46
AP3D1O14617 RNU6-537P-201ENST00000517277 103 ntBASIC-0.34□□□□□ -2.46
AP3D1O14617 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.34□□□□□ -2.46
AP3D1O14617 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 RNA5SP205-201ENST00000364653 136 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 MIR548M-201ENST00000408260 86 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 SCARNA23-201ENST00000516060 130 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 AC012531.4-201ENST00000616509 177 ntBASIC-0.35□□□□□ -2.47
AP3D1O14617 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 RNU6-132P-201ENST00000383863 107 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 RNU6-476P-201ENST00000384726 107 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 MIR3064-201ENST00000581130 66 ntBASIC-0.36□□□□□ -2.47
AP3D1O14617 MIR548U-201ENST00000390728 81 ntBASIC-0.37□□□□□ -2.47
AP3D1O14617 RNU6-972P-201ENST00000391208 107 ntBASIC-0.37□□□□□ -2.47
AP3D1O14617 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.37□□□□□ -2.47
AP3D1O14617 MIR548Z-201ENST00000584743 97 ntBASIC-0.37□□□□□ -2.47
AP3D1O14617 SNORA63.2-201ENST00000362603 126 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 RNA5SP257-201ENST00000363023 116 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 RNU6-795P-201ENST00000516323 103 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 AC104996.3-201ENST00000590718 94 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 AL365222.1-201ENST00000614661 98 ntBASIC-0.38□□□□□ -2.47
AP3D1O14617 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORD114-4-201ENST00000363962 75 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORD113-1-201ENST00000365321 69 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 RNU6-54P-201ENST00000365563 107 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORA24B-201ENST00000384176 131 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 MIR329-2-201ENST00000385029 84 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORA49-201ENST00000386157 136 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORA19.1-201ENST00000410656 129 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.39□□□□□ -2.47
AP3D1O14617 SNORD2-201ENST00000459163 69 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 RNU6-62P-201ENST00000516526 102 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 MIR4263-201ENST00000584745 83 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 AL590491.3-201ENST00000610731 82 ntBASIC-0.39□□□□□ -2.47
AP3D1O14617 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.4□□□□□ -2.47
AP3D1O14617 RNU6-887P-201ENST00000410660 100 ntBASIC-0.4□□□□□ -2.47
AP3D1O14617 RNU6-589P-201ENST00000516485 107 ntBASIC-0.4□□□□□ -2.47
AP3D1O14617 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
AP3D1O14617 SNORD58A-201ENST00000383875 65 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 RNU6-22P-201ENST00000384355 107 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 MIR1302-5-201ENST00000408164 150 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 AC145423.2-201ENST00000610631 239 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.41□□□□□ -2.48
AP3D1O14617 RNU6-106P-201ENST00000384405 107 ntBASIC-0.42□□□□□ -2.48
AP3D1O14617 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
AP3D1O14617 RNU6-519P-201ENST00000410590 108 ntBASIC-0.42□□□□□ -2.48
AP3D1O14617 RNU6-479P-201ENST00000516348 105 ntBASIC-0.42□□□□□ -2.48
AP3D1O14617 SNORD116-10-201ENST00000363791 102 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 MIR548E-201ENST00000408287 88 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.43□□□□□ -2.48
AP3D1O14617 RNU7-24P-201ENST00000458867 62 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 SNORD42B-201ENST00000458893 67 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 MIR3910-1-201ENST00000580936 111 ntBASIC-0.43□□□□□ -2.48
AP3D1O14617 RNU6-495P-201ENST00000362995 107 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 SNORD114-31-201ENST00000363219 75 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 MIR9-2-201ENST00000384838 87 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 RNU6-554P-201ENST00000410466 106 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 AC096531.1-201ENST00000419107 107 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 IGLVI-20-201ENST00000519296 130 ntBASIC-0.44□□□□□ -2.48
AP3D1O14617 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.44□□□□□ -2.48
AP3D1O14617 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 MIR582-201ENST00000365731 98 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 RNU6-900P-201ENST00000384498 102 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 MIR590-201ENST00000385008 97 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 FGF7P7-201ENST00000514120 227 ntBASIC-0.45□□□□□ -2.48
AP3D1O14617 RNU6-158P-201ENST00000517104 100 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 1136.9 ms