Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 TRDV1-202ENST00000621643 102 ntBASIC0.28□□□□□ -2.36
DDX4Q9NQI0 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 SNORA19-201ENST00000384737 128 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 MIR181B2-201ENST00000385004 89 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 AC073261.1-201ENST00000429409 121 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 U7.6-201ENST00000610841 64 ntBASIC0.27□□□□□ -2.37
DDX4Q9NQI0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 RNU6-904P-201ENST00000516206 101 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 RNA5SP395-201ENST00000516567 118 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 MIR3613-201ENST00000579844 87 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 RNU6-86P-201ENST00000606534 107 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
DDX4Q9NQI0 RNU6-813P-201ENST00000384691 107 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 RNU6-269P-201ENST00000391077 97 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 Y_RNA.596-201ENST00000410462 109 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 Y_RNA.648-201ENST00000459455 110 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 SCARNA23-201ENST00000516060 130 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 Y_RNA.709-201ENST00000516952 92 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 MIR548AI-201ENST00000579940 88 ntBASIC0.25□□□□□ -2.37
DDX4Q9NQI0 MIR4315-1-201ENST00000636800 73 ntBASIC0.24□□□□□ -2.37
DDX4Q9NQI0 MIR4315-2-201ENST00000640925 73 ntBASIC0.24□□□□□ -2.37
DDX4Q9NQI0 RNU6-106P-201ENST00000384405 107 ntBASIC0.23□□□□□ -2.37
DDX4Q9NQI0 MIR617-201ENST00000385030 97 ntBASIC0.23□□□□□ -2.37
DDX4Q9NQI0 MIR760-201ENST00000390220 80 ntBASIC0.23□□□□□ -2.37
DDX4Q9NQI0 U2.22-201ENST00000636441 106 ntBASIC0.23□□□□□ -2.37
DDX4Q9NQI0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
DDX4Q9NQI0 RNU6-957P-201ENST00000363652 99 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 RNA5SP128-201ENST00000365305 116 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 RNU6-644P-201ENST00000391155 98 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 RNU6-554P-201ENST00000410466 106 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 MIR4752-201ENST00000579672 72 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
DDX4Q9NQI0 Y_RNA.283-201ENST00000364798 112 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.705-201ENST00000516862 110 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 MTRNR2L2-201ENST00000604882 87 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 RNU1-29P-201ENST00000606574 126 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.818-201ENST00000618813 71 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 AC025521.1-201ENST00000621624 286 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 U6.100-201ENST00000636230 99 ntBASIC0.21□□□□□ -2.38
DDX4Q9NQI0 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 RNU6-972P-201ENST00000391208 107 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 AC006210.1-201ENST00000424882 111 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 MIR2113-201ENST00000459007 91 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 AL513043.2-201ENST00000573941 143 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 MIR4777-201ENST00000583710 86 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 uc_338.28-201ENST00000612082 187 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.2□□□□□ -2.38
DDX4Q9NQI0 RNU6-766P-201ENST00000362478 107 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 RNU6-1325P-201ENST00000364905 105 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 SNORD101-201ENST00000384027 73 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.467-201ENST00000384297 102 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 MIR216B-201ENST00000390186 82 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 SNORA19.1-201ENST00000410656 129 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 snoU13.11-201ENST00000459219 104 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 RNU6-287P-201ENST00000516230 98 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 RNU6-795P-201ENST00000516323 103 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 AC103810.7-201ENST00000607821 91 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 AC012531.4-201ENST00000616509 177 ntBASIC0.19□□□□□ -2.38
DDX4Q9NQI0 RNU6-756P-201ENST00000383997 107 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 MIR519E-201ENST00000385075 84 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 SNORD110-201ENST00000408189 75 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 AL161932.1-201ENST00000437408 146 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 RNA5SP484-201ENST00000458857 111 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 RNU6-1057P-201ENST00000517162 102 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 SNORA70.25-201ENST00000612741 95 ntBASIC0.18□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.107-201ENST00000363190 121 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.207-201ENST00000364142 106 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 RNU1-141P-201ENST00000364623 158 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.544-201ENST00000384650 113 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 MIR590-201ENST00000385008 97 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 RNU6-65P-201ENST00000516332 98 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 RNU6-537P-201ENST00000517277 103 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 NAMPTP3-201ENST00000569273 224 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 MIR548AG2-201ENST00000581228 64 ntBASIC0.17□□□□□ -2.38
DDX4Q9NQI0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
DDX4Q9NQI0 RNU6-664P-201ENST00000362381 107 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 RNU6-1290P-201ENST00000362957 109 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.93-201ENST00000363066 109 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 Y_RNA.291-201ENST00000364886 113 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 RNU6-887P-201ENST00000410660 100 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 AL031737.1-201ENST00000450125 223 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 RNA5SP285-201ENST00000516619 119 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 MIR4536-1-201ENST00000583537 88 ntBASIC0.16□□□□□ -2.38
DDX4Q9NQI0 RNY4P18-201ENST00000391107 89 ntBASIC0.15□□□□□ -2.39
DDX4Q9NQI0 RNU6-935P-201ENST00000410371 100 ntBASIC0.15□□□□□ -2.39
DDX4Q9NQI0 MIR4696-201ENST00000581431 70 ntBASIC0.15□□□□□ -2.39
DDX4Q9NQI0 AC069503.3-201ENST00000618674 145 ntBASIC0.15□□□□□ -2.39
DDX4Q9NQI0 Y_RNA.239-201ENST00000364444 113 ntBASIC0.14□□□□□ -2.39
DDX4Q9NQI0 RNU6-652P-201ENST00000365488 107 ntBASIC0.14□□□□□ -2.39
DDX4Q9NQI0 MIR501-201ENST00000390204 84 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms