Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 SNORA49-201ENST00000386157 136 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 RNU6-466P-201ENST00000391224 103 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.94□□□□□ -2.56
PKNOX2Q96KN3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 RNU6-235P-201ENST00000362644 107 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 RNA5SP136-201ENST00000410906 107 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 RN7SKP19-201ENST00000516016 252 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 AC145423.2-201ENST00000610631 239 ntBASIC-0.95□□□□□ -2.56
PKNOX2Q96KN3 MIR548D2-201ENST00000384955 97 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 RNU7-197P-201ENST00000458836 62 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 SNORD2-201ENST00000459163 69 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 AC021146.6-201ENST00000514659 117 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 SCARNA17-201ENST00000516183 144 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 RNY1P9-201ENST00000532431 109 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 U4.1-201ENST00000620349 87 ntBASIC-0.96□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 RNU6-915P-201ENST00000364943 103 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 RNU4-11P-201ENST00000365287 132 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 AL353813.1-201ENST00000440700 253 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 SNORD57-201ENST00000448188 72 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 snoU13.13-201ENST00000458842 104 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 MIR6851-201ENST00000617060 67 ntBASIC-0.97□□□□□ -2.56
PKNOX2Q96KN3 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 RNA5SP266-201ENST00000410273 108 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 RNU6-935P-201ENST00000410371 100 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 RNU6-881P-201ENST00000516813 102 ntBASIC-0.98□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 RNU6-647P-201ENST00000364243 107 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 RNU6-460P-201ENST00000391158 108 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 AC141273.2-201ENST00000618989 130 ntBASIC-0.99□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.283-201ENST00000364798 112 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.307-201ENST00000365022 117 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 RNU6-409P-201ENST00000384114 104 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 MIR1263-201ENST00000408324 86 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.677-201ENST00000516401 85 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 SNORD38.3-201ENST00000516599 73 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 AP002392.1-201ENST00000537692 208 ntBASIC-1□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.01□□□□□ -2.57
PKNOX2Q96KN3 MIR587-201ENST00000384845 96 ntBASIC-1.01□□□□□ -2.57
PKNOX2Q96KN3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.01□□□□□ -2.57
PKNOX2Q96KN3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.01□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 SNORD114-4-201ENST00000363962 75 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 RNU6-86P-201ENST00000606534 107 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 AL442128.1-201ENST00000615151 90 ntBASIC-1.02□□□□□ -2.57
PKNOX2Q96KN3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 RNU4-36P-201ENST00000364294 144 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 RNU6-973P-201ENST00000364690 107 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 U3.27-201ENST00000391237 200 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 AL118496.2-201ENST00000448300 230 ntBASIC-1.03□□□□□ -2.57
PKNOX2Q96KN3 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 RNU6-54P-201ENST00000365563 107 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 MIR582-201ENST00000365731 98 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 MIR451A-201ENST00000385059 72 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 MIR548E-201ENST00000408287 88 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 RNU6-762P-201ENST00000517107 102 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 SNORA81.3-201ENST00000517283 198 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 MIR6738-201ENST00000619620 64 ntBASIC-1.04□□□□□ -2.58
PKNOX2Q96KN3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 MIR4324-201ENST00000584846 72 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 AP001340.1-201ENST00000624405 217 ntBASIC-1.05□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.06□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.06□□□□□ -2.58
PKNOX2Q96KN3 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.06□□□□□ -2.58
PKNOX2Q96KN3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
PKNOX2Q96KN3 RNU6-861P-201ENST00000516745 106 ntBASIC-1.06□□□□□ -2.58
PKNOX2Q96KN3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.07□□□□□ -2.58
PKNOX2Q96KN3 RNY4P6-201ENST00000363667 96 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms