Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX2-3Q8TAU0 SNORA44.1-201ENST00000517031 108 ntBASIC2.31□□□□□ -2.04
NKX2-3Q8TAU0 RNU4-88P-201ENST00000411220 86 ntBASIC2.3□□□□□ -2.04
NKX2-3Q8TAU0 RPS26P5-201ENST00000418544 335 ntBASIC2.3□□□□□ -2.04
NKX2-3Q8TAU0 AC036111.3-201ENST00000526389 112 ntBASIC2.3□□□□□ -2.04
NKX2-3Q8TAU0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX2-3Q8TAU0 RNA5SP190-201ENST00000365222 118 ntBASIC2.29□□□□□ -2.04
NKX2-3Q8TAU0 RNU6-364P-201ENST00000384387 107 ntBASIC2.29□□□□□ -2.04
NKX2-3Q8TAU0 AC067940.1-201ENST00000458411 300 ntBASIC2.29□□□□□ -2.04
NKX2-3Q8TAU0 MIR4676-201ENST00000583078 72 ntBASIC2.29□□□□□ -2.04
NKX2-3Q8TAU0 Y_RNA.379-201ENST00000365653 102 ntBASIC2.28□□□□□ -2.04
NKX2-3Q8TAU0 MIR938-201ENST00000401216 83 ntBASIC2.28□□□□□ -2.04
NKX2-3Q8TAU0 AP1B1P2-201ENST00000416196 106 ntBASIC2.28□□□□□ -2.04
NKX2-3Q8TAU0 SNORA25.15-201ENST00000516487 89 ntBASIC2.28□□□□□ -2.04
NKX2-3Q8TAU0 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 RNU6-520P-201ENST00000384717 104 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 SNORD111-201ENST00000408139 94 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 uc_338.10-201ENST00000621872 182 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 AC027335.2-201ENST00000624030 375 ntBASIC2.27□□□□□ -2.05
NKX2-3Q8TAU0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 Y_RNA.250-201ENST00000364542 110 ntBASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 MIR9-3-201ENST00000385084 90 ntBASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 SNORA67.5-201ENST00000391036 107 ntBASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 HMGN2P38-201ENST00000423806 265 ntBASIC2.26□□□□□ -2.05
NKX2-3Q8TAU0 SNORD33-201ENST00000362761 85 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 RNU6-54P-201ENST00000365563 107 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 MIR519E-201ENST00000385075 84 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 MIR30A-201ENST00000385092 71 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 SNORA75.1-201ENST00000391130 148 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
NKX2-3Q8TAU0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 Y_RNA.174-201ENST00000363781 105 ntBASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 RNU7-102P-201ENST00000458948 62 ntBASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 SNORD13-201ENST00000459299 104 ntBASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 SNORA40.17-201ENST00000517256 115 ntBASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 AC106800.4-201ENST00000614905 153 ntBASIC2.24□□□□□ -2.05
NKX2-3Q8TAU0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 SNORD115-24-201ENST00000363528 82 ntBASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 SNORD42B-201ENST00000458893 67 ntBASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 RNU7-161P-201ENST00000517289 62 ntBASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 MIR3198-2-201ENST00000577868 80 ntBASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 uc_338.16-201ENST00000621804 95 ntBASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NKX2-3Q8TAU0 MIR302D-201ENST00000362275 68 ntBASIC2.22□□□□□ -2.05
NKX2-3Q8TAU0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.22□□□□□ -2.05
NKX2-3Q8TAU0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-1312P-201ENST00000362425 108 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 Y_RNA.330-201ENST00000365230 109 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 RNU4-62P-201ENST00000410125 130 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 snoU13.9-201ENST00000458927 103 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 RNU7-40P-201ENST00000516397 64 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NKX2-3Q8TAU0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NKX2-3Q8TAU0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-165P-201ENST00000517170 99 ntBASIC2.2□□□□□ -2.06
NKX2-3Q8TAU0 MIR4804-201ENST00000581683 73 ntBASIC2.2□□□□□ -2.06
NKX2-3Q8TAU0 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
NKX2-3Q8TAU0 RNU6V-201ENST00000384105 107 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-1162P-201ENST00000384443 104 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 RNU7-56P-201ENST00000458744 62 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 RNU7-74P-201ENST00000459104 62 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 SNORA31.14-201ENST00000516728 116 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-902P-201ENST00000517212 91 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 MIR548V-201ENST00000584165 80 ntBASIC2.19□□□□□ -2.06
NKX2-3Q8TAU0 SNORD1A-201ENST00000364968 72 ntBASIC2.18□□□□□ -2.06
NKX2-3Q8TAU0 SNORD113-2-201ENST00000391082 72 ntBASIC2.18□□□□□ -2.06
NKX2-3Q8TAU0 MIR8081-201ENST00000611533 95 ntBASIC2.18□□□□□ -2.06
NKX2-3Q8TAU0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
NKX2-3Q8TAU0 Y_RNA.32-201ENST00000362589 110 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-753P-201ENST00000363926 107 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-1065P-201ENST00000384513 106 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 MIR521-2-201ENST00000384818 87 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 AC018659.1-201ENST00000551083 169 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 BX248123.2-201ENST00000606318 124 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 MIR8063-201ENST00000621930 81 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 AC067863.3-201ENST00000624172 122 ntBASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-698P-201ENST00000363523 107 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-34P-201ENST00000364874 107 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 MIR630-201ENST00000384957 97 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 RNU1-119P-201ENST00000391122 165 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 AC079140.2-201ENST00000506193 142 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 MIR6504-201ENST00000613520 61 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 AC084768.2-201ENST00000622736 221 ntBASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NKX2-3Q8TAU0 RNU6-990P-201ENST00000364385 104 ntBASIC2.15□□□□□ -2.07
NKX2-3Q8TAU0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NKX2-3Q8TAU0 SNORA75.2-201ENST00000391138 150 ntBASIC2.15□□□□□ -2.07
NKX2-3Q8TAU0 SNORA75.3-201ENST00000391231 150 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms