Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC140658.3-201ENST00000567603 271 ntBASIC1.16□□□□□ -2.22
PHC3Q8NDX5 AL353765.1-201ENST00000605514 183 ntBASIC1.16□□□□□ -2.22
PHC3Q8NDX5 AC244669.1-204ENST00000621564 178 ntBASIC1.16□□□□□ -2.22
PHC3Q8NDX5 MIR18A-201ENST00000362310 71 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 Y_RNA.437-201ENST00000384113 113 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 RNU6-935P-201ENST00000410371 100 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 MIR4666B-201ENST00000578142 81 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.15□□□□□ -2.23
PHC3Q8NDX5 MIR548L-201ENST00000408303 86 ntBASIC1.14□□□□□ -2.23
PHC3Q8NDX5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.14□□□□□ -2.23
PHC3Q8NDX5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
PHC3Q8NDX5 Y_RNA.207-201ENST00000364142 106 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 RNY4P3-201ENST00000365254 95 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 SNORD78.1-201ENST00000390866 65 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
PHC3Q8NDX5 RNU6-1124P-201ENST00000384169 107 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 RNA5SP222-201ENST00000411039 105 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 RNU6-287P-201ENST00000516230 98 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 RNA5SP102-201ENST00000516865 106 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 RNA5SP47-201ENST00000517230 109 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
PHC3Q8NDX5 RNU7-74P-201ENST00000459104 62 ntBASIC1.11□□□□□ -2.23
PHC3Q8NDX5 snoU13.18-201ENST00000459483 104 ntBASIC1.11□□□□□ -2.23
PHC3Q8NDX5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
PHC3Q8NDX5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.11□□□□□ -2.23
PHC3Q8NDX5 MIR3920-201ENST00000581751 86 ntBASIC1.11□□□□□ -2.23
PHC3Q8NDX5 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.11□□□□□ -2.23
PHC3Q8NDX5 MIR4452-201ENST00000583004 71 ntBASIC1.1□□□□□ -2.23
PHC3Q8NDX5 RNU5F-1-201ENST00000362507 117 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 RNU6-652P-201ENST00000365488 107 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 RNU6-1126P-201ENST00000384002 107 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 MIR451A-201ENST00000385059 72 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.09□□□□□ -2.23
PHC3Q8NDX5 MIR2113-201ENST00000459007 91 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 RPL39P28-201ENST00000465655 155 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 FGF7P7-201ENST00000514120 227 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
PHC3Q8NDX5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
PHC3Q8NDX5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 RNU6-1051P-201ENST00000365471 102 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 MIR608-201ENST00000384820 100 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 RNU6-129P-201ENST00000391022 107 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 Y_RNA.685-201ENST00000516532 108 ntBASIC1.08□□□□□ -2.24
PHC3Q8NDX5 RNU6-228P-201ENST00000362700 106 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 RNU6-624P-201ENST00000363411 107 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 MIR489-201ENST00000384923 84 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 MIR617-201ENST00000385030 97 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 MIR216B-201ENST00000390186 82 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 Y_RNA.660-201ENST00000516002 120 ntBASIC1.07□□□□□ -2.24
PHC3Q8NDX5 SNORA36.2-201ENST00000384004 127 ntBASIC1.06□□□□□ -2.24
PHC3Q8NDX5 RNU6-42P-201ENST00000384165 107 ntBASIC1.06□□□□□ -2.24
PHC3Q8NDX5 SNORA63.2-201ENST00000362603 126 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 RNU6-716P-201ENST00000365621 103 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 RNU6-787P-201ENST00000384032 107 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 SNORD41.1-201ENST00000391000 69 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 U3.27-201ENST00000391237 200 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 RNA5SP220-201ENST00000516298 104 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
PHC3Q8NDX5 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 Y_RNA.264-201ENST00000364665 102 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 RNU6-726P-201ENST00000364680 107 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 Y_RNA.313-201ENST00000365095 103 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 MIR1255A-201ENST00000408338 113 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 RNU6-380P-201ENST00000410207 107 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 RNA5SP227-201ENST00000516184 113 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 RNU6-557P-201ENST00000516842 110 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 RNA5SP94-201ENST00000516917 108 ntBASIC1.04□□□□□ -2.24
PHC3Q8NDX5 SNORD77.2-201ENST00000391045 68 ntBASIC1.03□□□□□ -2.24
PHC3Q8NDX5 AL450471.1-201ENST00000447509 127 ntBASIC1.03□□□□□ -2.24
PHC3Q8NDX5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.03□□□□□ -2.24
PHC3Q8NDX5 MIR548AG2-201ENST00000581228 64 ntBASIC1.03□□□□□ -2.24
PHC3Q8NDX5 MIR6828-201ENST00000636181 60 ntBASIC1.03□□□□□ -2.24
PHC3Q8NDX5 RNU6-315P-201ENST00000362666 107 ntBASIC1.02□□□□□ -2.25
PHC3Q8NDX5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.02□□□□□ -2.25
PHC3Q8NDX5 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
PHC3Q8NDX5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PHC3Q8NDX5 RNU6-208P-201ENST00000362431 107 ntBASIC1.01□□□□□ -2.25
PHC3Q8NDX5 MIR140-201ENST00000385282 100 ntBASIC1.01□□□□□ -2.25
PHC3Q8NDX5 RNA5SP268-201ENST00000516828 124 ntBASIC1.01□□□□□ -2.25
PHC3Q8NDX5 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
PHC3Q8NDX5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PHC3Q8NDX5 RNU6-161P-201ENST00000363051 106 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 RNU6-686P-201ENST00000364839 107 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 RNU6-110P-201ENST00000384508 104 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 MIR519E-201ENST00000385075 84 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 RNU6-1275P-201ENST00000391087 107 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 RNU6-1108P-201ENST00000516308 104 ntBASIC1□□□□□ -2.25
PHC3Q8NDX5 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
PHC3Q8NDX5 SNORD90-201ENST00000391145 111 ntBASIC0.99□□□□□ -2.25
PHC3Q8NDX5 RNU6-1052P-201ENST00000411398 104 ntBASIC0.99□□□□□ -2.25
PHC3Q8NDX5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
PHC3Q8NDX5 RNU6-719P-201ENST00000516671 104 ntBASIC0.99□□□□□ -2.25
PHC3Q8NDX5 MIR3140-201ENST00000583685 90 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms