Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC019235.1-201ENST00000503847 207 ntBASIC-1.92□□□□□ -2.72
HTTP42858 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.93□□□□□ -2.72
HTTP42858 MIR369-201ENST00000362155 70 ntBASIC-1.93□□□□□ -2.72
HTTP42858 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU6-247P-201ENST00000362636 107 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU6-828P-201ENST00000364876 107 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.93□□□□□ -2.72
HTTP42858 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNA5SP236-201ENST00000516169 116 ntBASIC-1.93□□□□□ -2.72
HTTP42858 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.93□□□□□ -2.72
HTTP42858 MIR4999-201ENST00000585029 91 ntBASIC-1.93□□□□□ -2.72
HTTP42858 AC104996.3-201ENST00000590718 94 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.93□□□□□ -2.72
HTTP42858 RNU6-521P-201ENST00000516663 105 ntBASIC-1.93□□□□□ -2.72
HTTP42858 AC092747.3-201ENST00000603769 301 ntBASIC-1.93□□□□□ -2.72
HTTP42858 MIR548I1-201ENST00000408810 149 ntBASIC-1.94□□□□□ -2.72
HTTP42858 C8orf59P2-201ENST00000603441 271 ntBASIC-1.94□□□□□ -2.72
HTTP42858 AC073114.1-201ENST00000612027 490 ntBASIC-1.94□□□□□ -2.72
HTTP42858 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.94□□□□□ -2.72
HTTP42858 RNU6-238P-201ENST00000363313 106 ntBASIC-1.94□□□□□ -2.72
HTTP42858 RNU6-669P-201ENST00000365575 107 ntBASIC-1.94□□□□□ -2.72
HTTP42858 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.94□□□□□ -2.72
HTTP42858 MIR548C-201ENST00000384815 97 ntBASIC-1.94□□□□□ -2.72
HTTP42858 MT-TT-201ENST00000387460 66 ntBASIC-1.94□□□□□ -2.72
HTTP42858 AC006927.3-201ENST00000638789 384 ntBASIC-1.94□□□□□ -2.72
HTTP42858 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.95□□□□□ -2.72
HTTP42858 RNU6-834P-201ENST00000362367 110 ntBASIC-1.95□□□□□ -2.72
HTTP42858 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.95□□□□□ -2.72
HTTP42858 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.95□□□□□ -2.72
HTTP42858 AL356010.1-201ENST00000456364 102 ntBASIC-1.95□□□□□ -2.72
HTTP42858 SNORD42A-201ENST00000459584 64 ntBASIC-1.95□□□□□ -2.72
HTTP42858 RNU6-598P-201ENST00000364017 105 ntBASIC-1.95□□□□□ -2.72
HTTP42858 SNORD113-3-201ENST00000364830 72 ntBASIC-1.95□□□□□ -2.72
HTTP42858 RNU6-842P-201ENST00000384269 107 ntBASIC-1.95□□□□□ -2.72
HTTP42858 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.95□□□□□ -2.72
HTTP42858 RNU7-164P-201ENST00000459221 62 ntBASIC-1.95□□□□□ -2.72
HTTP42858 AC005014.2-201ENST00000607795 599 ntBASIC-1.95□□□□□ -2.72
HTTP42858 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.96□□□□□ -2.72
HTTP42858 CCDC34P1-201ENST00000507441 517 ntBASIC-1.96□□□□□ -2.72
HTTP42858 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.96□□□□□ -2.72
HTTP42858 SNORD116.1-201ENST00000365628 92 ntBASIC-1.96□□□□□ -2.72
HTTP42858 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.96□□□□□ -2.72
HTTP42858 RN7SKP295-201ENST00000517264 153 ntBASIC-1.96□□□□□ -2.72
HTTP42858 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.96□□□□□ -2.72
HTTP42858 AC021753.1-201ENST00000635724 168 ntBASIC-1.96□□□□□ -2.72
HTTP42858 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.97□□□□□ -2.72
HTTP42858 MIR526A2-201ENST00000390198 65 ntBASIC-1.97□□□□□ -2.72
HTTP42858 MTND3P2-201ENST00000438452 342 ntBASIC-1.97□□□□□ -2.72
HTTP42858 MIR2053-201ENST00000459295 91 ntBASIC-1.97□□□□□ -2.72
HTTP42858 AC082651.2-201ENST00000496833 166 ntBASIC-1.97□□□□□ -2.72
HTTP42858 RNU6-649P-201ENST00000384463 107 ntBASIC-1.97□□□□□ -2.72
HTTP42858 MT-TW-201ENST00000387382 68 ntBASIC-1.97□□□□□ -2.72
HTTP42858 RNY4P18-201ENST00000391107 89 ntBASIC-1.97□□□□□ -2.72
HTTP42858 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.97□□□□□ -2.72
HTTP42858 MTND4LP1-201ENST00000446263 157 ntBASIC-1.97□□□□□ -2.72
HTTP42858 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.97□□□□□ -2.73
HTTP42858 SNORA24B-201ENST00000384176 131 ntBASIC-1.97□□□□□ -2.73
HTTP42858 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.97□□□□□ -2.73
HTTP42858 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.97□□□□□ -2.73
HTTP42858 MIR3064-201ENST00000581130 66 ntBASIC-1.97□□□□□ -2.73
HTTP42858 SNORD1B-201ENST00000363091 84 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU6-261P-201ENST00000459506 102 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU7-110P-201ENST00000516891 62 ntBASIC-1.98□□□□□ -2.73
HTTP42858 MIR3913-1-201ENST00000577744 102 ntBASIC-1.98□□□□□ -2.73
HTTP42858 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU6-306P-201ENST00000384617 107 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU7-6P-201ENST00000516845 62 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.98□□□□□ -2.73
HTTP42858 RNU6-99P-201ENST00000364721 107 ntBASIC-1.99□□□□□ -2.73
HTTP42858 SNORA75-201ENST00000384158 137 ntBASIC-1.99□□□□□ -2.73
HTTP42858 AL731563.1-201ENST00000442202 214 ntBASIC-1.99□□□□□ -2.73
HTTP42858 RNU7-123P-201ENST00000515911 60 ntBASIC-1.99□□□□□ -2.73
HTTP42858 RNU6-561P-201ENST00000516222 102 ntBASIC-1.99□□□□□ -2.73
HTTP42858 SNORA7.5-201ENST00000410672 110 ntBASIC-1.99□□□□□ -2.73
HTTP42858 SNORD5.1-201ENST00000458800 75 ntBASIC-1.99□□□□□ -2.73
HTTP42858 SNORD113-5-201ENST00000607261 78 ntBASIC-1.99□□□□□ -2.73
HTTP42858 AC092794.1-201ENST00000612734 582 ntBASIC-1.99□□□□□ -2.73
HTTP42858 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.99□□□□□ -2.73
HTTP42858 RNU6-413P-201ENST00000384115 107 ntBASIC-2□□□□□ -2.73
HTTP42858 Y_RNA.526-201ENST00000384572 110 ntBASIC-2□□□□□ -2.73
HTTP42858 RNU6-1149P-201ENST00000516810 97 ntBASIC-2□□□□□ -2.73
HTTP42858 RNU6-818P-201ENST00000364837 108 ntBASIC-2□□□□□ -2.73
HTTP42858 RNU6-310P-201ENST00000384655 107 ntBASIC-2□□□□□ -2.73
HTTP42858 RNU6-273P-201ENST00000516937 96 ntBASIC-2□□□□□ -2.73
HTTP42858 ZNF519P2-201ENST00000557032 169 ntBASIC-2□□□□□ -2.73
HTTP42858 Y_RNA.773-201ENST00000607168 90 ntBASIC-2□□□□□ -2.73
HTTP42858 AC022079.1-201ENST00000621546 602 ntBASIC-2□□□□□ -2.73
HTTP42858 MIR5688-201ENST00000580619 83 ntBASIC-2□□□□□ -2.73
HTTP42858 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.01□□□□□ -2.73
HTTP42858 RNU6-361P-201ENST00000364454 107 ntBASIC-2.01□□□□□ -2.73
HTTP42858 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.01□□□□□ -2.73
HTTP42858 SNORA18.5-201ENST00000516616 101 ntBASIC-2.01□□□□□ -2.73
HTTP42858 UBE2WP1-201ENST00000362030 340 ntBASIC-2.01□□□□□ -2.73
HTTP42858 SNORD38.1-201ENST00000363863 68 ntBASIC-2.01□□□□□ -2.73
HTTP42858 RNU6-38P-201ENST00000384085 107 ntBASIC-2.01□□□□□ -2.73
HTTP42858 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.01□□□□□ -2.73
HTTP42858 AL513043.2-201ENST00000573941 143 ntBASIC-2.01□□□□□ -2.73
HTTP42858 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms