Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
THBS1P07996 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
THBS1P07996 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
THBS1P07996 RNU6-1187P-201ENST00000364771 110 ntBASIC1.8□□□□□ -2.12
THBS1P07996 RNU6-614P-201ENST00000384369 107 ntBASIC1.8□□□□□ -2.12
THBS1P07996 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
THBS1P07996 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.8□□□□□ -2.12
THBS1P07996 MIR6509-201ENST00000614603 85 ntBASIC1.8□□□□□ -2.12
THBS1P07996 U6.59-201ENST00000615686 107 ntBASIC1.8□□□□□ -2.12
THBS1P07996 uc_338.16-201ENST00000621804 95 ntBASIC1.8□□□□□ -2.12
THBS1P07996 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
THBS1P07996 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
THBS1P07996 MIR7-2-201ENST00000384970 110 ntBASIC1.79□□□□□ -2.12
THBS1P07996 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
THBS1P07996 MIR3920-201ENST00000581751 86 ntBASIC1.79□□□□□ -2.12
THBS1P07996 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
THBS1P07996 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
THBS1P07996 Y_RNA.338-201ENST00000365320 114 ntBASIC1.78□□□□□ -2.12
THBS1P07996 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
THBS1P07996 SNORA31.14-201ENST00000516728 116 ntBASIC1.78□□□□□ -2.12
THBS1P07996 MIR548O2-201ENST00000616090 70 ntBASIC1.78□□□□□ -2.12
THBS1P07996 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
THBS1P07996 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
THBS1P07996 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
THBS1P07996 Y_RNA.32-201ENST00000362589 110 ntBASIC1.77□□□□□ -2.13
THBS1P07996 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
THBS1P07996 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
THBS1P07996 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
THBS1P07996 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
THBS1P07996 RNU6-369P-201ENST00000362515 102 ntBASIC1.76□□□□□ -2.13
THBS1P07996 RNU6-1335P-201ENST00000365426 107 ntBASIC1.76□□□□□ -2.13
THBS1P07996 MIR520F-201ENST00000384824 87 ntBASIC1.76□□□□□ -2.13
THBS1P07996 AC079150.2-201ENST00000443733 78 ntBASIC1.76□□□□□ -2.13
THBS1P07996 AC067863.3-201ENST00000624172 122 ntBASIC1.76□□□□□ -2.13
THBS1P07996 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
THBS1P07996 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
THBS1P07996 Y_RNA.375-201ENST00000365625 101 ntBASIC1.75□□□□□ -2.13
THBS1P07996 RNU7-104P-201ENST00000459398 79 ntBASIC1.75□□□□□ -2.13
THBS1P07996 RNU6-982P-201ENST00000516216 102 ntBASIC1.75□□□□□ -2.13
THBS1P07996 RNU7-161P-201ENST00000517289 62 ntBASIC1.75□□□□□ -2.13
THBS1P07996 MIR548AG2-201ENST00000581228 64 ntBASIC1.75□□□□□ -2.13
THBS1P07996 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
THBS1P07996 AL157834.3-201ENST00000615543 103 ntBASIC1.75□□□□□ -2.13
THBS1P07996 RNU6-910P-201ENST00000390844 107 ntBASIC1.74□□□□□ -2.13
THBS1P07996 SNORD12-201ENST00000391002 90 ntBASIC1.74□□□□□ -2.13
THBS1P07996 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
THBS1P07996 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
THBS1P07996 SNORD79.1-201ENST00000516069 84 ntBASIC1.74□□□□□ -2.13
THBS1P07996 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
THBS1P07996 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
THBS1P07996 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
THBS1P07996 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
THBS1P07996 Y_RNA.118-201ENST00000363300 101 ntBASIC1.73□□□□□ -2.13
THBS1P07996 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
THBS1P07996 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
THBS1P07996 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
THBS1P07996 MIR519E-201ENST00000385075 84 ntBASIC1.72□□□□□ -2.13
THBS1P07996 NAMPTP3-201ENST00000569273 224 ntBASIC1.72□□□□□ -2.13
THBS1P07996 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
THBS1P07996 AL136317.1-201ENST00000612653 226 ntBASIC1.72□□□□□ -2.13
THBS1P07996 RNU6-940P-201ENST00000363433 104 ntBASIC1.71□□□□□ -2.14
THBS1P07996 RNA5SP215-201ENST00000363440 122 ntBASIC1.71□□□□□ -2.14
THBS1P07996 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
THBS1P07996 RNA5SP117-201ENST00000365294 118 ntBASIC1.71□□□□□ -2.14
THBS1P07996 MIR633-201ENST00000384821 98 ntBASIC1.71□□□□□ -2.14
THBS1P07996 RNU6-469P-201ENST00000516253 101 ntBASIC1.71□□□□□ -2.14
THBS1P07996 MIR3657-201ENST00000584818 117 ntBASIC1.71□□□□□ -2.14
THBS1P07996 SNORA2.1-201ENST00000363089 137 ntBASIC1.7□□□□□ -2.14
THBS1P07996 RNU6-260P-201ENST00000384092 107 ntBASIC1.7□□□□□ -2.14
THBS1P07996 MIR1287-201ENST00000408492 90 ntBASIC1.7□□□□□ -2.14
THBS1P07996 SNORA70.22-201ENST00000517160 124 ntBASIC1.7□□□□□ -2.14
THBS1P07996 MIR4639-201ENST00000584938 69 ntBASIC1.7□□□□□ -2.14
THBS1P07996 AL109933.3-201ENST00000619095 188 ntBASIC1.7□□□□□ -2.14
THBS1P07996 SNORA25.5-201ENST00000363782 126 ntBASIC1.69□□□□□ -2.14
THBS1P07996 RNU6-302P-201ENST00000365249 107 ntBASIC1.69□□□□□ -2.14
THBS1P07996 RMST_2.1-201ENST00000617263 136 ntBASIC1.69□□□□□ -2.14
THBS1P07996 SNORD114-4-201ENST00000363962 75 ntBASIC1.68□□□□□ -2.14
THBS1P07996 RNU6-645P-201ENST00000364649 106 ntBASIC1.68□□□□□ -2.14
THBS1P07996 RNU6-54P-201ENST00000365563 107 ntBASIC1.68□□□□□ -2.14
THBS1P07996 RNU1-123P-201ENST00000458950 160 ntBASIC1.68□□□□□ -2.14
THBS1P07996 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
THBS1P07996 AC092634.7-201ENST00000621022 103 ntBASIC1.68□□□□□ -2.14
THBS1P07996 RNU1-17P-201ENST00000363022 152 ntBASIC1.67□□□□□ -2.14
THBS1P07996 Y_RNA.250-201ENST00000364542 110 ntBASIC1.67□□□□□ -2.14
THBS1P07996 MIR203A-201ENST00000384836 110 ntBASIC1.67□□□□□ -2.14
THBS1P07996 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
THBS1P07996 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
THBS1P07996 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.67□□□□□ -2.14
THBS1P07996 RNU6V-201ENST00000384105 107 ntBASIC1.66□□□□□ -2.14
THBS1P07996 SNORD41.1-201ENST00000391000 69 ntBASIC1.66□□□□□ -2.14
THBS1P07996 SCARNA21.1-201ENST00000515996 128 ntBASIC1.66□□□□□ -2.14
THBS1P07996 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
THBS1P07996 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
THBS1P07996 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
THBS1P07996 MIR548L-201ENST00000408303 86 ntBASIC1.65□□□□□ -2.15
THBS1P07996 AC002350.1-201ENST00000490759 375 ntBASIC1.65□□□□□ -2.15
THBS1P07996 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
THBS1P07996 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
THBS1P07996 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
THBS1P07996 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms