Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MIR6516-201ENST00000630554 81 ntBASIC2.23□□□□□ -2.05
DNMT3AQ9Y6K1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 RNU6-54P-201ENST00000365563 107 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 RNA5SP95-201ENST00000410319 137 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 AL157398.1-201ENST00000452981 186 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 AC008413.1-201ENST00000511864 177 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 MIR6082-201ENST00000613604 109 ntBASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
DNMT3AQ9Y6K1 Y_RNA.224-201ENST00000364308 111 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-990P-201ENST00000364385 104 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-580P-201ENST00000365159 107 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 MIR7-2-201ENST00000384970 110 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 U4.4-201ENST00000620626 117 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
DNMT3AQ9Y6K1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 MIR377-201ENST00000362145 69 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 SNORD113-2-201ENST00000391082 72 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 RNU7-119P-201ENST00000459279 63 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 AC008834.1-201ENST00000511612 175 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-231P-201ENST00000517122 103 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 MIR1273D-201ENST00000577266 86 ntBASIC2.2□□□□□ -2.06
DNMT3AQ9Y6K1 SNORA2.1-201ENST00000363089 137 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-838P-201ENST00000363399 108 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 RNA5SP245-201ENST00000364239 121 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 MIR1185-1-201ENST00000408598 86 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 MIR18B-201ENST00000454574 71 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 SNORD42B-201ENST00000458893 67 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 AC138907.6-201ENST00000568401 126 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 AC138869.1-201ENST00000568623 124 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
DNMT3AQ9Y6K1 SNORA41B-201ENST00000384785 128 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 SNORD116.2-201ENST00000391251 93 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 SNORA40.16-201ENST00000517238 121 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 MIR3664-201ENST00000579074 99 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 MIR548AG2-201ENST00000581228 64 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 MIR4422-201ENST00000581938 83 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 MIR6739-201ENST00000622461 75 ntBASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.18□□□□□ -2.06
DNMT3AQ9Y6K1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 MIR103A2-201ENST00000362154 78 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 RNA5SP264-201ENST00000363115 107 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 RNU1-78P-201ENST00000391248 165 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 MIR548X-201ENST00000580069 75 ntBASIC2.17□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-986P-201ENST00000363133 102 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 MIR517B-201ENST00000385102 67 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 RNU7-185P-201ENST00000459215 60 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 snoU13.21-201ENST00000459368 105 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 RNU7-174P-201ENST00000516248 59 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
DNMT3AQ9Y6K1 RNU6-698P-201ENST00000363523 107 ntBASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 RNU6-34P-201ENST00000364874 107 ntBASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 Y_RNA.330-201ENST00000365230 109 ntBASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 SNORA70B-201ENST00000384210 135 ntBASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 RNU6-269P-201ENST00000391077 97 ntBASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.15□□□□□ -2.07
DNMT3AQ9Y6K1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 RNA5SP432-201ENST00000362480 116 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 SNORD115-44-201ENST00000365391 82 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 MIR1257-201ENST00000408490 117 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 AL512310.8-201ENST00000550183 120 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 MIR548O2-201ENST00000616090 70 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
DNMT3AQ9Y6K1 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 RNU6-1126P-201ENST00000384002 107 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 AC098934.3-201ENST00000430450 190 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 RNU6-765P-201ENST00000516916 99 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 MIR4648-201ENST00000580107 72 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
DNMT3AQ9Y6K1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 MIR934-201ENST00000401241 83 ntBASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 RNU7-13P-201ENST00000516413 62 ntBASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 U2.7-201ENST00000619197 100 ntBASIC2.12□□□□□ -2.07
DNMT3AQ9Y6K1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
DNMT3AQ9Y6K1 snoU13.13-201ENST00000458842 104 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 256.5 ms