Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 SNORD101-201ENST00000384027 73 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 SNORA24B-201ENST00000384176 131 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 RNU7-185P-201ENST00000459215 60 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 AC005520.4-201ENST00000604337 90 ntBASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.79□□□□□ -2.12
RC3H2Q9HBD1 MIR101-2-201ENST00000362195 79 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 AC023934.1-201ENST00000574529 2389 ntBASIC1.78□□□□□ -2.12
RC3H2Q9HBD1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 RNU7-10P-201ENST00000607194 63 ntBASIC1.77□□□□□ -2.13
RC3H2Q9HBD1 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 RNU6-824P-201ENST00000363724 104 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 AC097635.1-201ENST00000450678 155 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 U6.81-201ENST00000612550 106 ntBASIC1.76□□□□□ -2.13
RC3H2Q9HBD1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 RNY4P3-201ENST00000365254 95 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD45A-201ENST00000384512 84 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 MIR1257-201ENST00000408490 117 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 SNORD83.1-201ENST00000411362 77 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.75□□□□□ -2.13
RC3H2Q9HBD1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR9-2-201ENST00000384838 87 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 RNU6-765P-201ENST00000516916 99 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 MIR3675-201ENST00000583661 73 ntBASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RC3H2Q9HBD1 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6-935P-201ENST00000410371 100 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 AC097510.1-201ENST00000510945 133 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
RC3H2Q9HBD1 SNORD115-22-201ENST00000364456 82 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR451A-201ENST00000385059 72 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR599-201ENST00000385069 95 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
RC3H2Q9HBD1 RNU6-681P-201ENST00000364012 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNA5SP245-201ENST00000364239 121 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-630P-201ENST00000391258 106 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 RNU6-719P-201ENST00000516671 104 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 MIR3664-201ENST00000579074 99 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.71□□□□□ -2.14
RC3H2Q9HBD1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.443-201ENST00000384135 111 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 SNORD116-24-201ENST00000384549 92 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
RC3H2Q9HBD1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 SNORA25.4-201ENST00000363666 124 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 MIR125B2-201ENST00000385128 89 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 RNU6-881P-201ENST00000516813 102 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC036111.3-201ENST00000526389 112 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC138907.6-201ENST00000568401 126 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 AC138869.1-201ENST00000568623 124 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RC3H2Q9HBD1 SNORD45.1-201ENST00000363181 77 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 RNU6-895P-201ENST00000384125 103 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AC093423.1-201ENST00000440817 142 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 AL512310.8-201ENST00000550183 120 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4771-2-201ENST00000577758 74 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4421-201ENST00000578133 69 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 MIR4771-1-201ENST00000582617 74 ntBASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RC3H2Q9HBD1 RNU6-934P-201ENST00000365154 107 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RNU6-987P-201ENST00000384759 104 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RNU6-604P-201ENST00000390917 100 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 MTND4LP19-201ENST00000403051 166 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
RC3H2Q9HBD1 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 241.9 ms