Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
UBE2OQ9C0C9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 SNORD113.3-201ENST00000364630 78 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 RNU6-934P-201ENST00000365154 107 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 MIR125B2-201ENST00000385128 89 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 MIR3937-201ENST00000580135 106 ntBASIC1.93□□□□□ -2.1
UBE2OQ9C0C9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 SNORD33-201ENST00000362761 85 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 SNORA75.2-201ENST00000391138 150 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 SNORA75.3-201ENST00000391231 150 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 MIR942-201ENST00000401111 86 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 Y_RNA.596-201ENST00000410462 109 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 AC048334.1-201ENST00000477975 159 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 MIR4771-2-201ENST00000577758 74 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 MIR4771-1-201ENST00000582617 74 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 MIR3140-201ENST00000583685 90 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 ZNF209P-201ENST00000593450 2304 ntBASIC1.92□□□□□ -2.1
UBE2OQ9C0C9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 RNU6-330P-201ENST00000363015 107 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 SNORA7.1-201ENST00000363750 139 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 SNORD114-22-201ENST00000365423 72 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 MIR599-201ENST00000385069 95 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 SNORD53B-201ENST00000577887 78 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 AL645939.4-201ENST00000604495 135 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UBE2OQ9C0C9 RNU6-340P-201ENST00000364005 107 ntBASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 Y_RNA.386-201ENST00000383913 105 ntBASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 RNU6-154P-201ENST00000384306 106 ntBASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 RNU6-1241P-201ENST00000384536 107 ntBASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 RNU6-540P-201ENST00000384622 101 ntBASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBE2OQ9C0C9 RNY4P3-201ENST00000365254 95 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 RNU6-291P-201ENST00000384720 107 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 MIR1265-201ENST00000408444 86 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 AC138907.6-201ENST00000568401 126 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 AC138869.1-201ENST00000568623 124 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 AL157834.3-201ENST00000615543 103 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 MIR6515-201ENST00000619843 57 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.89□□□□□ -2.11
UBE2OQ9C0C9 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 RNA5SP245-201ENST00000364239 121 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 Y_RNA.371-201ENST00000365591 113 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 SNORA24B-201ENST00000384176 131 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 RNU7-40P-201ENST00000516397 64 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 RNU7-156P-201ENST00000517214 74 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 AC106800.4-201ENST00000614905 153 ntBASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.88□□□□□ -2.11
UBE2OQ9C0C9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 SNORA8.1-201ENST00000384250 140 ntBASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 RNU6-935P-201ENST00000410371 100 ntBASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 MIR4676-201ENST00000583078 72 ntBASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
UBE2OQ9C0C9 SNORD115-31-201ENST00000365318 82 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 Y_RNA.606-201ENST00000410579 103 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 RPS26P5-201ENST00000418544 335 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 MIR2113-201ENST00000459007 91 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 SNORA31.2-201ENST00000516019 134 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 RNU1-92P-201ENST00000517017 135 ntBASIC1.86□□□□□ -2.11
UBE2OQ9C0C9 RNU6-369P-201ENST00000362515 102 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 Y_RNA.340-201ENST00000365330 92 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 RNU6-649P-201ENST00000384463 107 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 SNORD111-201ENST00000408139 94 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 AC023827.1-201ENST00000569247 97 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 AC022709.1-201ENST00000615967 87 ntBASIC1.85□□□□□ -2.11
UBE2OQ9C0C9 RNU6-535P-201ENST00000384722 107 ntBASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 MIR154-201ENST00000385243 84 ntBASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 AC125388.1-201ENST00000459631 156 ntBASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 U6.81-201ENST00000612550 106 ntBASIC1.84□□□□□ -2.11
UBE2OQ9C0C9 RNU6-824P-201ENST00000363724 104 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 MIR451A-201ENST00000385059 72 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 SNORD30.1-201ENST00000391309 70 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 RNU2-59P-201ENST00000410482 191 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 RN7SKP88-201ENST00000516847 250 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 7SK.8-201ENST00000612110 250 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 7SK.11-201ENST00000615477 250 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 7SK.13-201ENST00000622040 250 ntBASIC1.83□□□□□ -2.12
UBE2OQ9C0C9 Y_RNA.374-201ENST00000365606 101 ntBASIC1.82□□□□□ -2.12
UBE2OQ9C0C9 SNORA67.6-201ENST00000391093 99 ntBASIC1.82□□□□□ -2.12
UBE2OQ9C0C9 AC244505.6-201ENST00000452829 130 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms