Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU7-185P-201ENST00000459215 60 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.37□□□□□ -2.03
TRIM47Q96LD4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TRIM47Q96LD4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TRIM47Q96LD4 RNU6-495P-201ENST00000362995 107 ntBASIC2.36□□□□□ -2.03
TRIM47Q96LD4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM47Q96LD4 SUMO2P12-201ENST00000405924 140 ntBASIC2.36□□□□□ -2.03
TRIM47Q96LD4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM47Q96LD4 MIR5002-201ENST00000584713 97 ntBASIC2.36□□□□□ -2.03
TRIM47Q96LD4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM47Q96LD4 Y_RNA.355-201ENST00000365462 98 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 MIR1257-201ENST00000408490 117 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 RNU6-321P-201ENST00000410912 106 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 RNU6-765P-201ENST00000516916 99 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 MIR548AD-201ENST00000584780 82 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 SNRPGP19-201ENST00000603826 189 ntBASIC2.35□□□□□ -2.03
TRIM47Q96LD4 RNU6-580P-201ENST00000365159 107 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 MIR499A-201ENST00000384903 122 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 MIR513A1-201ENST00000385138 129 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 MIR1185-1-201ENST00000408598 86 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 MIR3657-201ENST00000584818 117 ntBASIC2.34□□□□□ -2.03
TRIM47Q96LD4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM47Q96LD4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM47Q96LD4 RNU6-302P-201ENST00000365249 107 ntBASIC2.33□□□□□ -2.04
TRIM47Q96LD4 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
TRIM47Q96LD4 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
TRIM47Q96LD4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.33□□□□□ -2.04
TRIM47Q96LD4 MIR548V-201ENST00000584165 80 ntBASIC2.33□□□□□ -2.04
TRIM47Q96LD4 RNA5SP245-201ENST00000364239 121 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 RNA5SP160-201ENST00000364866 120 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 RNU6-1089P-201ENST00000516473 104 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 AP003716.2-201ENST00000528260 108 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 MIR4529-201ENST00000578110 78 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 U1.36-201ENST00000620684 176 ntBASIC2.32□□□□□ -2.04
TRIM47Q96LD4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM47Q96LD4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM47Q96LD4 SNORD115-44-201ENST00000365391 82 ntBASIC2.31□□□□□ -2.04
TRIM47Q96LD4 snoU13.21-201ENST00000459368 105 ntBASIC2.31□□□□□ -2.04
TRIM47Q96LD4 AC055731.1-201ENST00000474387 401 ntBASIC2.31□□□□□ -2.04
TRIM47Q96LD4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM47Q96LD4 MIR103A2-201ENST00000362154 78 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 RNU6-947P-201ENST00000516264 106 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 RNU6-656P-201ENST00000516785 107 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 AC106800.4-201ENST00000614905 153 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 MIR8070-201ENST00000616510 88 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 uc_338.10-201ENST00000621872 182 ntBASIC2.3□□□□□ -2.04
TRIM47Q96LD4 MIR7-2-201ENST00000384970 110 ntBASIC2.29□□□□□ -2.04
TRIM47Q96LD4 TRMT112P2-201ENST00000512910 132 ntBASIC2.29□□□□□ -2.04
TRIM47Q96LD4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM47Q96LD4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM47Q96LD4 RNA5SP190-201ENST00000365222 118 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 RNU6-535P-201ENST00000384722 107 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 AL161935.2-201ENST00000414627 60 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 SNORD13-201ENST00000459299 104 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 RNU6-902P-201ENST00000517212 91 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 AP000553.5-201ENST00000641933 54 ntBASIC2.28□□□□□ -2.04
TRIM47Q96LD4 RNU6-260P-201ENST00000384092 107 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 SNORD83.1-201ENST00000411362 77 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 SNORA25.15-201ENST00000516487 89 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 AL359821.1-201ENST00000605519 182 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 GHRLOS.1-201ENST00000610995 70 ntBASIC2.27□□□□□ -2.05
TRIM47Q96LD4 RNA5SP264-201ENST00000363115 107 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 RNU6-54P-201ENST00000365563 107 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 RNU6-520P-201ENST00000384717 104 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 MIR630-201ENST00000384957 97 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 AC003989.2-201ENST00000440224 169 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 AL133373.1-201ENST00000497098 94 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 RNU7-13P-201ENST00000516413 62 ntBASIC2.26□□□□□ -2.05
TRIM47Q96LD4 RNU6-35P-201ENST00000384530 107 ntBASIC2.25□□□□□ -2.05
TRIM47Q96LD4 MIR216B-201ENST00000390186 82 ntBASIC2.25□□□□□ -2.05
TRIM47Q96LD4 AC244505.6-201ENST00000452829 130 ntBASIC2.25□□□□□ -2.05
TRIM47Q96LD4 RNA5SP147-201ENST00000516493 109 ntBASIC2.25□□□□□ -2.05
TRIM47Q96LD4 MIR548AG2-201ENST00000581228 64 ntBASIC2.25□□□□□ -2.05
TRIM47Q96LD4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM47Q96LD4 SNORA2.1-201ENST00000363089 137 ntBASIC2.24□□□□□ -2.05
TRIM47Q96LD4 RNU6-1126P-201ENST00000384002 107 ntBASIC2.24□□□□□ -2.05
TRIM47Q96LD4 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
TRIM47Q96LD4 RNU6-250P-201ENST00000516958 103 ntBASIC2.24□□□□□ -2.05
TRIM47Q96LD4 AL645939.4-201ENST00000604495 135 ntBASIC2.24□□□□□ -2.05
TRIM47Q96LD4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM47Q96LD4 MIR125B2-201ENST00000385128 89 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 RNU4-62P-201ENST00000410125 130 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 AP1B1P2-201ENST00000416196 106 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 RNU6-980P-201ENST00000516925 103 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 AC008608.1-201ENST00000603910 127 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 MIR548O2-201ENST00000616090 70 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.23□□□□□ -2.05
TRIM47Q96LD4 MIR548C-201ENST00000384815 97 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms