Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
LYSMD3Q7Z3D4 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
LYSMD3Q7Z3D4 MIR4511-201ENST00000582784 87 ntBASIC2.02□□□□□ -2.09
LYSMD3Q7Z3D4 AC008608.1-201ENST00000603910 127 ntBASIC2.02□□□□□ -2.09
LYSMD3Q7Z3D4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LYSMD3Q7Z3D4 RNU6-364P-201ENST00000384387 107 ntBASIC2.01□□□□□ -2.09
LYSMD3Q7Z3D4 AC244505.6-201ENST00000452829 130 ntBASIC2.01□□□□□ -2.09
LYSMD3Q7Z3D4 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
LYSMD3Q7Z3D4 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 RNU6-752P-201ENST00000516376 102 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 RNU6-548P-201ENST00000517083 115 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 AL512310.8-201ENST00000550183 120 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 AC103706.3-201ENST00000636297 85 ntBASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2□□□□□ -2.09
LYSMD3Q7Z3D4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 SNORD33-201ENST00000362761 85 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 SNORD111-201ENST00000408139 94 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 AC244098.3-201ENST00000424803 96 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 AC023827.1-201ENST00000569247 97 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 AC106800.4-201ENST00000614905 153 ntBASIC1.99□□□□□ -2.09
LYSMD3Q7Z3D4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 MIR938-201ENST00000401216 83 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 RNU7-102P-201ENST00000458948 62 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 AL078603.1-201ENST00000603824 313 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 AC027335.2-201ENST00000624030 375 ntBASIC1.98□□□□□ -2.09
LYSMD3Q7Z3D4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LYSMD3Q7Z3D4 SNORD115-44-201ENST00000365391 82 ntBASIC1.97□□□□□ -2.09
LYSMD3Q7Z3D4 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
LYSMD3Q7Z3D4 RNU6-295P-201ENST00000516901 104 ntBASIC1.97□□□□□ -2.09
LYSMD3Q7Z3D4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LYSMD3Q7Z3D4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LYSMD3Q7Z3D4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.96□□□□□ -2.1
LYSMD3Q7Z3D4 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
LYSMD3Q7Z3D4 AL109933.3-201ENST00000619095 188 ntBASIC1.96□□□□□ -2.1
LYSMD3Q7Z3D4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LYSMD3Q7Z3D4 AC110620.1-201ENST00000416042 228 ntBASIC1.95□□□□□ -2.1
LYSMD3Q7Z3D4 AL691482.2-201ENST00000457453 84 ntBASIC1.95□□□□□ -2.1
LYSMD3Q7Z3D4 SNORA31.2-201ENST00000516019 134 ntBASIC1.95□□□□□ -2.1
LYSMD3Q7Z3D4 RNA5SP182-201ENST00000516064 82 ntBASIC1.95□□□□□ -2.1
LYSMD3Q7Z3D4 RNU6-369P-201ENST00000362515 102 ntBASIC1.94□□□□□ -2.1
LYSMD3Q7Z3D4 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
LYSMD3Q7Z3D4 RNU6-982P-201ENST00000516216 102 ntBASIC1.94□□□□□ -2.1
LYSMD3Q7Z3D4 RNU7-13P-201ENST00000516413 62 ntBASIC1.94□□□□□ -2.1
LYSMD3Q7Z3D4 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 SNORA40.6-201ENST00000391153 128 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 SNORD75.2-201ENST00000408784 58 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 RN7SKP88-201ENST00000516847 250 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 SNORA44.1-201ENST00000517031 108 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 MIR4804-201ENST00000581683 73 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 7SK.8-201ENST00000612110 250 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 7SK.11-201ENST00000615477 250 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 7SK.13-201ENST00000622040 250 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
LYSMD3Q7Z3D4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 AL603825.1-201ENST00000438481 80 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 RNA5SP458-201ENST00000516188 119 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 MIR548AG2-201ENST00000581228 64 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 AC069503.3-201ENST00000618674 145 ntBASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LYSMD3Q7Z3D4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 RNU6-669P-201ENST00000365575 107 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 AL591704.2-201ENST00000421658 181 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 RNU7-56P-201ENST00000458744 62 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 SNORA31.14-201ENST00000516728 116 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
LYSMD3Q7Z3D4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 RNA5SP403-201ENST00000363598 108 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-1126P-201ENST00000384002 107 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 RNU7-21P-201ENST00000459430 62 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-977P-201ENST00000516411 103 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 uc_338.16-201ENST00000621804 95 ntBASIC1.9□□□□□ -2.11
LYSMD3Q7Z3D4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-495P-201ENST00000362995 107 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 SNORD115-24-201ENST00000363528 82 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 MIR633-201ENST00000384821 98 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 RNU1-119P-201ENST00000391122 165 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 RNU6-994P-201ENST00000410507 111 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 RNU7-24P-201ENST00000458867 62 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 NAMPTP3-201ENST00000569273 224 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 MIR3920-201ENST00000581751 86 ntBASIC1.89□□□□□ -2.11
LYSMD3Q7Z3D4 AL157834.3-201ENST00000615543 103 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms