Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC244505.6-201ENST00000452829 130 ntBASIC2.09□□□□□ -2.07
CLCN1P35523 RNU6-523P-201ENST00000516304 54 ntBASIC2.09□□□□□ -2.07
CLCN1P35523 RNU6-70P-201ENST00000516438 60 ntBASIC2.09□□□□□ -2.07
CLCN1P35523 MIR4781-201ENST00000585250 76 ntBASIC2.09□□□□□ -2.07
CLCN1P35523 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLCN1P35523 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLCN1P35523 SNORA40.18-201ENST00000391200 128 ntBASIC2.08□□□□□ -2.08
CLCN1P35523 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLCN1P35523 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.08□□□□□ -2.08
CLCN1P35523 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
CLCN1P35523 MIR7111-201ENST00000619751 72 ntBASIC2.08□□□□□ -2.08
CLCN1P35523 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
CLCN1P35523 Y_RNA.371-201ENST00000365591 113 ntBASIC2.07□□□□□ -2.08
CLCN1P35523 MIR451A-201ENST00000385059 72 ntBASIC2.07□□□□□ -2.08
CLCN1P35523 RNU6-1057P-201ENST00000517162 102 ntBASIC2.07□□□□□ -2.08
CLCN1P35523 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 SNORD12-201ENST00000391002 90 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 AC074348.1-201ENST00000426503 132 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 MIR4419B-201ENST00000577260 68 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 AL359821.1-201ENST00000605519 182 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
CLCN1P35523 RNU6-788P-201ENST00000390967 104 ntBASIC2.05□□□□□ -2.08
CLCN1P35523 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCN1P35523 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CLCN1P35523 MIR1827-201ENST00000408549 66 ntBASIC2.05□□□□□ -2.08
CLCN1P35523 RNU6-1052P-201ENST00000411398 104 ntBASIC2.05□□□□□ -2.08
CLCN1P35523 RNU6-719P-201ENST00000516671 104 ntBASIC2.05□□□□□ -2.08
CLCN1P35523 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLCN1P35523 Y_RNA.32-201ENST00000362589 110 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 Y_RNA.226-201ENST00000364337 114 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 AC114801.3-201ENST00000510231 177 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 RNU6-871P-201ENST00000516122 100 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 SNORA31.14-201ENST00000516728 116 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.04□□□□□ -2.08
CLCN1P35523 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
CLCN1P35523 Y_RNA.174-201ENST00000363781 105 ntBASIC2.03□□□□□ -2.08
CLCN1P35523 RNU6-1053P-201ENST00000515930 101 ntBASIC2.03□□□□□ -2.08
CLCN1P35523 RNU6-1015P-201ENST00000517121 99 ntBASIC2.03□□□□□ -2.08
CLCN1P35523 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CLCN1P35523 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLCN1P35523 RNU6-997P-201ENST00000384725 107 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 MIR4285-201ENST00000581001 85 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 uc_338.16-201ENST00000621804 95 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 MIR664A-201ENST00000626086 82 ntBASIC2.02□□□□□ -2.09
CLCN1P35523 RNU6-340P-201ENST00000364005 107 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 SNORD115-44-201ENST00000365391 82 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 SNORA8.1-201ENST00000384250 140 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 MIR1287-201ENST00000408492 90 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 AC002429.1-201ENST00000437672 148 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 RNU6-287P-201ENST00000516230 98 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 RNU7-13P-201ENST00000516413 62 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 RMST_2.1-201ENST00000617263 136 ntBASIC2.01□□□□□ -2.09
CLCN1P35523 SNORD115-24-201ENST00000363528 82 ntBASIC2□□□□□ -2.09
CLCN1P35523 RNU6-681P-201ENST00000364012 104 ntBASIC2□□□□□ -2.09
CLCN1P35523 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLCN1P35523 AC097510.1-201ENST00000510945 133 ntBASIC1.99□□□□□ -2.09
CLCN1P35523 Y_RNA.36-201ENST00000362602 112 ntBASIC1.98□□□□□ -2.09
CLCN1P35523 Y_RNA.118-201ENST00000363300 101 ntBASIC1.98□□□□□ -2.09
CLCN1P35523 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
CLCN1P35523 RNU6-154P-201ENST00000384306 106 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 SNORA25-201ENST00000384384 134 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 RNU6-587P-201ENST00000391282 106 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 RNU2-59P-201ENST00000410482 191 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.97□□□□□ -2.09
CLCN1P35523 RNU6-687P-201ENST00000516443 89 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 MIR4498-201ENST00000577599 66 ntBASIC1.97□□□□□ -2.09
CLCN1P35523 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLCN1P35523 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CLCN1P35523 RNU6-330P-201ENST00000363015 107 ntBASIC1.96□□□□□ -2.1
CLCN1P35523 MIR942-201ENST00000401111 86 ntBASIC1.96□□□□□ -2.1
CLCN1P35523 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.96□□□□□ -2.1
CLCN1P35523 RNA5SP327-201ENST00000362494 101 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 SNORA24B-201ENST00000384176 131 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLCN1P35523 Y_RNA.606-201ENST00000410579 103 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.95□□□□□ -2.1
CLCN1P35523 AL136317.1-201ENST00000612653 226 ntBASIC1.95□□□□□ -2.1
CLCN1P35523 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLCN1P35523 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 RNA5SP403-201ENST00000363598 108 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 RNA5SP117-201ENST00000365294 118 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 SNORD89-201ENST00000390981 114 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 U3.27-201ENST00000391237 200 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 MIR2113-201ENST00000459007 91 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 RNU7-104P-201ENST00000459398 79 ntBASIC1.94□□□□□ -2.1
CLCN1P35523 RNU6-824P-201ENST00000363724 104 ntBASIC1.93□□□□□ -2.1
CLCN1P35523 MIR154-201ENST00000385243 84 ntBASIC1.93□□□□□ -2.1
CLCN1P35523 RNU6-634P-201ENST00000459134 106 ntBASIC1.93□□□□□ -2.1
CLCN1P35523 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
CLCN1P35523 U6.81-201ENST00000612550 106 ntBASIC1.93□□□□□ -2.1
CLCN1P35523 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLCN1P35523 RNU6-1177P-201ENST00000391058 104 ntBASIC1.92□□□□□ -2.1
CLCN1P35523 RNU7-161P-201ENST00000517289 62 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 268.2 ms