Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU6-54P-201ENST00000365563 107 ntBASIC-1.47□□□□□ -2.64
RPA3P35244 MTND1P19-201ENST00000511780 315 ntBASIC-1.47□□□□□ -2.64
RPA3P35244 MIR4308-201ENST00000580634 81 ntBASIC-1.47□□□□□ -2.64
RPA3P35244 AL137067.1-201ENST00000615933 120 ntBASIC-1.47□□□□□ -2.64
RPA3P35244 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 RNU6-309P-201ENST00000364573 106 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 SNORD74.6-201ENST00000364796 70 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 snoU13.11-201ENST00000459219 104 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 MIR3149-201ENST00000584629 83 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 uc_338.19-201ENST00000616808 99 ntBASIC-1.48□□□□□ -2.65
RPA3P35244 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 RNU6-713P-201ENST00000384761 107 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 SNORA75.5-201ENST00000391291 81 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 MTND5P20-201ENST00000448677 143 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 MTND4P29-201ENST00000503122 1372 ntBASIC-1.49□□□□□ -2.65
RPA3P35244 SNORD115-19-201ENST00000363098 82 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 SNORD115-18-201ENST00000363293 82 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 SNORD115-17-201ENST00000364612 82 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 SNORD18B-201ENST00000365659 72 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 RNU6-466P-201ENST00000391224 103 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 RNU6-274P-201ENST00000459566 107 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 MIR4499-201ENST00000584834 69 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 AC108081.1-201ENST00000604358 221 ntBASIC-1.5□□□□□ -2.65
RPA3P35244 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 RNU6-905P-201ENST00000384434 107 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 MT-TW-201ENST00000387382 68 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 RNU6-588P-201ENST00000410281 105 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 RNU6-935P-201ENST00000410371 100 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 snoR1.1-201ENST00000628177 80 ntBASIC-1.51□□□□□ -2.65
RPA3P35244 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 SNORD114-4-201ENST00000363962 75 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 RNY4P28-201ENST00000365281 93 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 MT-TI-201ENST00000387365 69 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.52□□□□□ -2.65
RPA3P35244 AP002392.1-201ENST00000537692 208 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 MIR1255B1-201ENST00000636325 63 ntBASIC-1.52□□□□□ -2.65
RPA3P35244 RNU6-235P-201ENST00000362644 107 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 MT-TD-201ENST00000387419 68 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 MIR548G-201ENST00000408442 89 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 RNU6-90P-201ENST00000606352 106 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 MIR6738-201ENST00000619620 64 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 MIR6844-201ENST00000637122 62 ntBASIC-1.53□□□□□ -2.65
RPA3P35244 RNU6-24P-201ENST00000384440 107 ntBASIC-1.54□□□□□ -2.66
RPA3P35244 SNORA7.5-201ENST00000410672 110 ntBASIC-1.54□□□□□ -2.66
RPA3P35244 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.54□□□□□ -2.66
RPA3P35244 AC021753.1-201ENST00000635724 168 ntBASIC-1.54□□□□□ -2.66
RPA3P35244 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 MIR451A-201ENST00000385059 72 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 SNORD64-201ENST00000386683 67 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 MIR1302-6-201ENST00000408466 90 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 AL353813.1-201ENST00000440700 253 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 SNORD42B-201ENST00000458893 67 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 RNA5SP67-201ENST00000516422 131 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 MIR378F-201ENST00000578143 78 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 MIR4324-201ENST00000584846 72 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 AL512310.12-203ENST00000640543 90 ntBASIC-1.55□□□□□ -2.66
RPA3P35244 RNY1P11-201ENST00000363759 113 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 RNU6-431P-201ENST00000383874 107 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 RNU6-985P-201ENST00000410182 104 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 RNU6-592P-201ENST00000411333 103 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.56□□□□□ -2.66
RPA3P35244 AC107027.2-201ENST00000512197 115 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 RNA5SP470-201ENST00000516463 106 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 AC140658.3-201ENST00000567603 271 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 MIR3163-201ENST00000581592 73 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 MIR6773-201ENST00000612812 74 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 AC134503.1-201ENST00000633048 54 ntBASIC-1.56□□□□□ -2.66
RPA3P35244 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 SNORD38.1-201ENST00000363863 68 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 MIR548P-201ENST00000408336 84 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 SNORD18.2-201ENST00000459604 70 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 U6.104-201ENST00000637979 90 ntBASIC-1.57□□□□□ -2.66
RPA3P35244 RN7SKP19-201ENST00000516016 252 ntBASIC-1.58□□□□□ -2.66
RPA3P35244 AL160413.1-201ENST00000622780 310 ntBASIC-1.58□□□□□ -2.66
RPA3P35244 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.59□□□□□ -2.66
RPA3P35244 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.59□□□□□ -2.66
RPA3P35244 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.59□□□□□ -2.66
RPA3P35244 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.59□□□□□ -2.66
RPA3P35244 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.59□□□□□ -2.66
RPA3P35244 MIR8062-201ENST00000621515 85 ntBASIC-1.59□□□□□ -2.66
RPA3P35244 MIR147A-201ENST00000385079 72 ntBASIC-1.6□□□□□ -2.67
RPA3P35244 SNORD127-201ENST00000458892 86 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms