Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC107027.2-201ENST00000512197 115 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 AC108081.1-201ENST00000604358 221 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 MIR1302-1-201ENST00000637932 143 ntBASIC-1.28□□□□□ -2.61
CD40LGP29965 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 SNORD114-4-201ENST00000363962 75 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 MIR216B-201ENST00000390186 82 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 SNORD75.2-201ENST00000408784 58 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 RNU6-75P-201ENST00000515944 104 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.29□□□□□ -2.62
CD40LGP29965 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 SNORD77B-201ENST00000391112 67 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 RNU4-61P-201ENST00000411243 107 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 Z83846.1-201ENST00000446798 265 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 AL121914.1-201ENST00000450188 156 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 RNU6-240P-201ENST00000516098 97 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 RNU6-719P-201ENST00000516671 104 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.3□□□□□ -2.62
CD40LGP29965 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.3□□□□□ -2.62
CD40LGP29965 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 RNU6-495P-201ENST00000362995 107 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 RNU6-164P-201ENST00000364604 103 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 RNU6-450P-201ENST00000364654 107 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 MIR548H3-201ENST00000408771 118 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 AC113618.1-201ENST00000416747 285 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 FGF7P6-202ENST00000451282 293 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 SNORD19B-201ENST00000459623 84 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.31□□□□□ -2.62
CD40LGP29965 RNU6-774P-201ENST00000363238 107 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 RNU6-704P-201ENST00000364162 103 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 RNU6-823P-201ENST00000391042 103 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 MIR1252-201ENST00000408861 65 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 RNU6-651P-201ENST00000411040 105 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 SNORD2.1-201ENST00000458762 69 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 RNU7-164P-201ENST00000459221 62 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 SNORA40.15-201ENST00000516884 107 ntBASIC-1.32□□□□□ -2.62
CD40LGP29965 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.32□□□□□ -2.62
CD40LGP29965 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 MT-TI-201ENST00000387365 69 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 ELOCP20-201ENST00000422460 345 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 RNA5SP180-201ENST00000516181 101 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 AC021443.1-201ENST00000604478 211 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 AL132765.2-201ENST00000610812 351 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 AL365265.1-201ENST00000621045 234 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 U6.96-201ENST00000636425 70 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 MIR1246-201ENST00000636535 73 ntBASIC-1.33□□□□□ -2.62
CD40LGP29965 RNU6-508P-201ENST00000363231 103 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 RNU6-103P-201ENST00000363686 107 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 RNU6-770P-201ENST00000363929 105 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 RNU6-806P-201ENST00000365147 105 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 SNORD19-201ENST00000391191 68 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 U3.27-201ENST00000391237 200 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.34□□□□□ -2.62
CD40LGP29965 AC021146.9-201ENST00000512503 156 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 RNU6-521P-201ENST00000516663 105 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.34□□□□□ -2.62
CD40LGP29965 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 MIR487B-201ENST00000385021 84 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 MIR507-201ENST00000385234 94 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 AC022028.1-201ENST00000412054 408 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 AC090616.4-201ENST00000448026 115 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 RNY3P15-201ENST00000516297 97 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 MIR3140-201ENST00000583685 90 ntBASIC-1.35□□□□□ -2.63
CD40LGP29965 RNU6-924P-201ENST00000362926 108 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 SNORA24B-201ENST00000384176 131 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 RNU6-80P-201ENST00000384195 107 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 SNORD116-4-201ENST00000384733 96 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 MIR1255B2-201ENST00000408618 67 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 AC138907.4-201ENST00000570107 226 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 MIR548AG1-201ENST00000579932 66 ntBASIC-1.36□□□□□ -2.63
CD40LGP29965 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 SNORA33.1-201ENST00000364957 130 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 AL078595.1-201ENST00000404458 226 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 FGF7P7-201ENST00000514120 227 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 MIR4744-201ENST00000581563 82 ntBASIC-1.37□□□□□ -2.63
CD40LGP29965 MIR1255B1-201ENST00000636325 63 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms