Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC099799.1-201ENST00000439809 192 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 Z83846.1-201ENST00000446798 265 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 MTND4LP30-201ENST00000454092 297 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 HSPE1P25-201ENST00000455484 251 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 RNU7-24P-201ENST00000458867 62 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 SNORD54-201ENST00000459159 67 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 AL050303.3-201ENST00000613704 284 ntBASIC-2.7□□□□□ -2.84
HMGN4O00479 SNORD113-8-201ENST00000363497 74 ntBASIC-2.71□□□□□ -2.84
HMGN4O00479 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.71□□□□□ -2.84
HMGN4O00479 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.71□□□□□ -2.84
HMGN4O00479 RPS29P30-201ENST00000600975 111 ntBASIC-2.71□□□□□ -2.84
HMGN4O00479 RNU6-90P-201ENST00000606352 106 ntBASIC-2.71□□□□□ -2.84
HMGN4O00479 UBE2WP1-201ENST00000362030 340 ntBASIC-2.72□□□□□ -2.84
HMGN4O00479 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.72□□□□□ -2.84
HMGN4O00479 RNU6-75P-201ENST00000515944 104 ntBASIC-2.72□□□□□ -2.84
HMGN4O00479 AC103591.3-201ENST00000608684 209 ntBASIC-2.72□□□□□ -2.84
HMGN4O00479 MTND5P26-201ENST00000426018 1752 ntBASIC-2.72□□□□□ -2.85
HMGN4O00479 RNU6-194P-201ENST00000363862 105 ntBASIC-2.73□□□□□ -2.85
HMGN4O00479 MIR548G-201ENST00000408442 89 ntBASIC-2.73□□□□□ -2.85
HMGN4O00479 RNU4-90P-201ENST00000362773 141 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 RNU6-774P-201ENST00000363238 107 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 RNU6-211P-201ENST00000384047 107 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 RNU6-956P-201ENST00000458868 103 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 MTND3P22-201ENST00000510932 243 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 MIR4272-201ENST00000635924 64 ntBASIC-2.74□□□□□ -2.85
HMGN4O00479 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.75□□□□□ -2.85
HMGN4O00479 SNORA63.2-201ENST00000362603 126 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 RNU6-695P-201ENST00000391157 104 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 AL603755.1-201ENST00000619504 163 ntBASIC-2.75□□□□□ -2.85
HMGN4O00479 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.76□□□□□ -2.85
HMGN4O00479 RNU4-24P-201ENST00000364565 139 ntBASIC-2.76□□□□□ -2.85
HMGN4O00479 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.76□□□□□ -2.85
HMGN4O00479 snoU13.17-201ENST00000458802 104 ntBASIC-2.76□□□□□ -2.85
HMGN4O00479 AC015540.1-201ENST00000615828 501 ntBASIC-2.76□□□□□ -2.85
HMGN4O00479 SNORA25.1-201ENST00000362326 128 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 RNU6-890P-201ENST00000384121 107 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.77□□□□□ -2.85
HMGN4O00479 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.77□□□□□ -2.85
HMGN4O00479 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.77□□□□□ -2.85
HMGN4O00479 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.78□□□□□ -2.85
HMGN4O00479 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.78□□□□□ -2.85
HMGN4O00479 RNU6-260P-201ENST00000384092 107 ntBASIC-2.78□□□□□ -2.85
HMGN4O00479 RNU6-310P-201ENST00000384655 107 ntBASIC-2.78□□□□□ -2.85
HMGN4O00479 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.78□□□□□ -2.85
HMGN4O00479 SNORD38.1-201ENST00000363863 68 ntBASIC-2.79□□□□□ -2.86
HMGN4O00479 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.79□□□□□ -2.86
HMGN4O00479 MIR519A2-201ENST00000384990 87 ntBASIC-2.79□□□□□ -2.86
HMGN4O00479 RNU6-130P-201ENST00000411112 103 ntBASIC-2.79□□□□□ -2.86
HMGN4O00479 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.8□□□□□ -2.86
HMGN4O00479 RNU6-841P-201ENST00000383872 107 ntBASIC-2.8□□□□□ -2.86
HMGN4O00479 RNU7-88P-201ENST00000458752 63 ntBASIC-2.8□□□□□ -2.86
HMGN4O00479 U7.5-201ENST00000517224 61 ntBASIC-2.8□□□□□ -2.86
HMGN4O00479 SNORA24B-201ENST00000384176 131 ntBASIC-2.81□□□□□ -2.86
HMGN4O00479 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.81□□□□□ -2.86
HMGN4O00479 RNU6-584P-201ENST00000410350 95 ntBASIC-2.81□□□□□ -2.86
HMGN4O00479 RNA5SP147-201ENST00000516493 109 ntBASIC-2.81□□□□□ -2.86
HMGN4O00479 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 RNU6-326P-201ENST00000365480 107 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.82□□□□□ -2.86
HMGN4O00479 RNU6-65P-201ENST00000516332 98 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 MIR3140-201ENST00000583685 90 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.82□□□□□ -2.86
HMGN4O00479 RNA5SP93-201ENST00000362525 114 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 RNU6-259P-201ENST00000383999 107 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 RNU6-510P-201ENST00000391239 108 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 MIR548Q-201ENST00000408404 100 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.83□□□□□ -2.86
HMGN4O00479 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 MIR4536-1-201ENST00000583537 88 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 AC037487.3-201ENST00000606668 112 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 MIR376A1-201ENST00000616574 68 ntBASIC-2.83□□□□□ -2.86
HMGN4O00479 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.83□□□□□ -2.86
HMGN4O00479 RNU6-381P-201ENST00000391259 108 ntBASIC-2.84□□□□□ -2.86
HMGN4O00479 SNORA19.1-201ENST00000410656 129 ntBASIC-2.84□□□□□ -2.86
HMGN4O00479 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 RNU6-290P-201ENST00000365212 101 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 MIR559-201ENST00000385188 96 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 RNU4-88P-201ENST00000411220 86 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 ELOCP20-201ENST00000422460 345 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 AL121914.1-201ENST00000450188 156 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 RNU6-518P-201ENST00000516056 96 ntBASIC-2.85□□□□□ -2.87
HMGN4O00479 SNORA40.14-201ENST00000516543 86 ntBASIC-2.85□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms