Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MIR6844-201ENST00000637122 62 ntBASIC-1.21□□□□□ -2.6
DFFAO00273 RNU6-973P-201ENST00000364690 107 ntBASIC-1.22□□□□□ -2.6
DFFAO00273 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.22□□□□□ -2.6
DFFAO00273 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.22□□□□□ -2.6
DFFAO00273 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.22□□□□□ -2.6
DFFAO00273 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.22□□□□□ -2.6
DFFAO00273 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.22□□□□□ -2.6
DFFAO00273 MTND5P18-201ENST00000445624 1801 ntBASIC-1.22□□□□□ -2.61
DFFAO00273 RNU6-639P-201ENST00000384074 107 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR548H3-201ENST00000408771 118 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 RNU6-588P-201ENST00000410281 105 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR3646-201ENST00000578301 84 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR3179-1-201ENST00000578940 84 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR3179-2-201ENST00000579107 84 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR3179-3-201ENST00000579566 84 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR5704-201ENST00000584029 77 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 MIR3179-4-201ENST00000617599 84 ntBASIC-1.23□□□□□ -2.61
DFFAO00273 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 SNORA33.2-201ENST00000365413 134 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 SNORD101-201ENST00000384027 73 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 MIR518B-201ENST00000385127 83 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 MIR4801-201ENST00000582704 82 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 AC108081.1-201ENST00000604358 221 ntBASIC-1.24□□□□□ -2.61
DFFAO00273 RNU6-238P-201ENST00000363313 106 ntBASIC-1.25□□□□□ -2.61
DFFAO00273 SNORD114-25-201ENST00000363742 72 ntBASIC-1.25□□□□□ -2.61
DFFAO00273 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.25□□□□□ -2.61
DFFAO00273 SPINT5P-201ENST00000448174 155 ntBASIC-1.25□□□□□ -2.61
DFFAO00273 snoU13.11-201ENST00000459219 104 ntBASIC-1.25□□□□□ -2.61
DFFAO00273 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.25□□□□□ -2.61
DFFAO00273 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.26□□□□□ -2.61
DFFAO00273 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.26□□□□□ -2.61
DFFAO00273 SNORD22.1-201ENST00000516331 125 ntBASIC-1.26□□□□□ -2.61
DFFAO00273 MIR4696-201ENST00000581431 70 ntBASIC-1.26□□□□□ -2.61
DFFAO00273 MIR3163-201ENST00000581592 73 ntBASIC-1.26□□□□□ -2.61
DFFAO00273 RNU6-664P-201ENST00000362381 107 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 RNU6-30P-201ENST00000384561 107 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 SNORD83B-201ENST00000386745 93 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 RNU6-466P-201ENST00000391224 103 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 RNU2-38P-201ENST00000410856 79 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 MTND2P23-201ENST00000422990 651 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 AC097510.1-201ENST00000510945 133 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.27□□□□□ -2.61
DFFAO00273 MIR582-201ENST00000365731 98 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 MT-TI-201ENST00000387365 69 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 RNU6-935P-201ENST00000410371 100 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 MIR1255B1-201ENST00000636325 63 ntBASIC-1.28□□□□□ -2.61
DFFAO00273 RNU6-235P-201ENST00000362644 107 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 RNY1P11-201ENST00000363759 113 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 RNU6-476P-201ENST00000384726 107 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 MIR548G-201ENST00000408442 89 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 AL500527.2-201ENST00000454105 95 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 MTATP8P1-201ENST00000467115 207 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 SCARNA17-201ENST00000516183 144 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 RNU6-90P-201ENST00000606352 106 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 MIR8068-201ENST00000618032 68 ntBASIC-1.29□□□□□ -2.62
DFFAO00273 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 RNU6-312P-201ENST00000364629 107 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 MIR517B-201ENST00000385102 67 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 RNU6-918P-201ENST00000391219 106 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.3□□□□□ -2.62
DFFAO00273 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 AC021753.1-201ENST00000635724 168 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 AL512310.12-203ENST00000640543 90 ntBASIC-1.3□□□□□ -2.62
DFFAO00273 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 SNORD38.1-201ENST00000363863 68 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 SNORD114-4-201ENST00000363962 75 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 RNU6-54P-201ENST00000365563 107 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 SNORD58.1-201ENST00000391313 66 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 SNORA7.5-201ENST00000410672 110 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 SNORD127-201ENST00000458892 86 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 RNU6-762P-201ENST00000517107 102 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 MIR6854-201ENST00000614935 69 ntBASIC-1.31□□□□□ -2.62
DFFAO00273 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.32□□□□□ -2.62
DFFAO00273 AC022137.1-201ENST00000483735 151 ntBASIC-1.32□□□□□ -2.62
DFFAO00273 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.32□□□□□ -2.62
DFFAO00273 SNORD37.2-201ENST00000391075 66 ntBASIC-1.33□□□□□ -2.62
DFFAO00273 AP000533.3-201ENST00000447704 118 ntBASIC-1.33□□□□□ -2.62
DFFAO00273 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.33□□□□□ -2.62
DFFAO00273 RNA5SP67-201ENST00000516422 131 ntBASIC-1.33□□□□□ -2.62
DFFAO00273 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.34□□□□□ -2.62
DFFAO00273 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.34□□□□□ -2.62
DFFAO00273 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.34□□□□□ -2.62
DFFAO00273 MIR451A-201ENST00000385059 72 ntBASIC-1.34□□□□□ -2.62
DFFAO00273 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.34□□□□□ -2.62
DFFAO00273 SNORD74.6-201ENST00000364796 70 ntBASIC-1.35□□□□□ -2.63
DFFAO00273 AP002392.1-201ENST00000537692 208 ntBASIC-1.35□□□□□ -2.63
DFFAO00273 MIR6738-201ENST00000619620 64 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 339.1 ms