Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-824P-201ENST00000363724 104 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-681P-201ENST00000364012 104 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR1257-201ENST00000408490 117 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU4-37P-201ENST00000410214 84 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR18B-201ENST00000454574 71 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-881P-201ENST00000516813 102 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU7-10P-201ENST00000607194 63 ntBASIC1.52□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-1260P-201ENST00000362944 107 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AL133373.1-201ENST00000497098 94 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR6082-201ENST00000613604 109 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR8063-201ENST00000621930 81 ntBASIC1.51□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR377-201ENST00000362145 69 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 Y_RNA.56-201ENST00000362798 112 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 Y_RNA.443-201ENST00000384135 111 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR451A-201ENST00000385059 72 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR599-201ENST00000385069 95 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-604P-201ENST00000390917 100 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AP003716.2-201ENST00000528260 108 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR4773-1-201ENST00000637203 78 ntBASIC1.5□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 SNORD115-22-201ENST00000364456 82 ntBASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AC097510.1-201ENST00000510945 133 ntBASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AC015688.6-201ENST00000577737 104 ntBASIC1.49□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 SNORA25.4-201ENST00000363666 124 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR519A1-201ENST00000385257 85 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-935P-201ENST00000410371 100 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 Y_RNA.606-201ENST00000410579 103 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.48□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 SNORD113.1-201ENST00000363280 73 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-499P-201ENST00000365615 107 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 SNORA77B-201ENST00000578179 125 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 U6.81-201ENST00000612550 106 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 AL109933.3-201ENST00000619095 188 ntBASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
C1QTNF3-AMACRE9PGA6 RNU6-1216P-201ENST00000362590 107 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-934P-201ENST00000365154 107 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AC097635.1-201ENST00000450678 155 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-1057P-201ENST00000517162 102 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AL359821.1-201ENST00000605519 182 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR8053-201ENST00000613344 75 ntBASIC1.46□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 SNORA24B-201ENST00000384176 131 ntBASIC1.45□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 SNORD116-24-201ENST00000384549 92 ntBASIC1.45□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-382P-201ENST00000365181 106 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-535P-201ENST00000384722 107 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-274P-201ENST00000459566 107 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AC138907.6-201ENST00000568401 126 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AC138869.1-201ENST00000568623 124 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MTRNR2L2-201ENST00000604882 87 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR8074-201ENST00000615081 81 ntBASIC1.44□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 Y_RNA.258-201ENST00000364613 105 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR633-201ENST00000384821 98 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR125B2-201ENST00000385128 89 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-1177P-201ENST00000391058 104 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-321P-201ENST00000410912 106 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AC244098.3-201ENST00000424803 96 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-982P-201ENST00000516216 102 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-287P-201ENST00000516230 98 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AC023827.1-201ENST00000569247 97 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-1265P-201ENST00000516342 103 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 RNU6-765P-201ENST00000516916 99 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 MIR4511-201ENST00000582784 87 ntBASIC1.41□□□□□ -2.18
C1QTNF3-AMACRE9PGA6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms