Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR4509-2-201ENST00000583920 94 ntBASIC-3□□□□□ -2.89
AP4S1Q9Y587 VTRNA2-1-201ENST00000602301 127 ntBASIC-3□□□□□ -2.89
AP4S1Q9Y587 MIR4509-1-201ENST00000618224 94 ntBASIC-3□□□□□ -2.89
AP4S1Q9Y587 AC090617.10-201ENST00000624308 134 ntBASIC-3□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.01□□□□□ -2.89
AP4S1Q9Y587 SNORD63-201ENST00000384262 68 ntBASIC-3.01□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.577-201ENST00000384794 101 ntBASIC-3.01□□□□□ -2.89
AP4S1Q9Y587 RNU6-120P-201ENST00000516077 103 ntBASIC-3.01□□□□□ -2.89
AP4S1Q9Y587 MIR548AG1-201ENST00000579932 66 ntBASIC-3.01□□□□□ -2.89
AP4S1Q9Y587 UBE2WP1-201ENST00000362030 340 ntBASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.152-201ENST00000363578 100 ntBASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 RNU6-608P-201ENST00000383927 104 ntBASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 RNU7-164P-201ENST00000459221 62 ntBASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 MIR3140-201ENST00000583685 90 ntBASIC-3.02□□□□□ -2.89
AP4S1Q9Y587 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.190-201ENST00000363964 101 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 RNU6-553P-201ENST00000364047 96 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.222-201ENST00000364264 102 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 Y_RNA.599-201ENST00000410489 109 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 RNU6-561P-201ENST00000516222 102 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 RNU6-1213P-201ENST00000517075 94 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 AC040904.1-201ENST00000590850 223 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 AC021443.1-201ENST00000604478 211 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 U2.1-201ENST00000618978 145 ntBASIC-3.03□□□□□ -2.89
AP4S1Q9Y587 RNU6-260P-201ENST00000384092 107 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 SNORA24B-201ENST00000384176 131 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 MIR496-201ENST00000385226 102 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 MT-TM-201ENST00000387377 68 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 RNU6-521P-201ENST00000516663 105 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 RNU6-453P-201ENST00000516819 85 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 AC005899.2-201ENST00000584353 90 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 AC048344.4-201ENST00000619744 527 ntBASIC-3.04□□□□□ -2.9
AP4S1Q9Y587 RNU6-978P-201ENST00000364371 103 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 RNU6-332P-201ENST00000391193 108 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 MTND5P5-201ENST00000503764 376 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 RNU6-518P-201ENST00000516056 96 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 AC138305.3-201ENST00000624988 240 ntBASIC-3.05□□□□□ -2.9
AP4S1Q9Y587 SNORA63.2-201ENST00000362603 126 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 MTND3P10-201ENST00000450967 341 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 RNU6-240P-201ENST00000516098 97 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 RNA5SP236-201ENST00000516169 116 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 MIR4528-201ENST00000577763 90 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.772-201ENST00000606692 102 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 AC018645.2-201ENST00000609151 472 ntBASIC-3.06□□□□□ -2.9
AP4S1Q9Y587 MIR1207-201ENST00000408249 87 ntBASIC-3.07□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.07□□□□□ -2.9
AP4S1Q9Y587 RNU6-1064P-201ENST00000410626 104 ntBASIC-3.07□□□□□ -2.9
AP4S1Q9Y587 RNU6-911P-201ENST00000516523 104 ntBASIC-3.07□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.182-201ENST00000363880 111 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 RNU6-563P-201ENST00000364872 108 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.481-201ENST00000384373 102 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 RNU6-258P-201ENST00000390884 101 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 MIR548G-201ENST00000408442 89 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 AL731563.1-201ENST00000442202 214 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 MTND2P14-201ENST00000482139 351 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 AC138907.4-201ENST00000570107 226 ntBASIC-3.08□□□□□ -2.9
AP4S1Q9Y587 RNU6-1214P-201ENST00000363650 109 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 RNU4-24P-201ENST00000364565 139 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 Y_RNA.526-201ENST00000384572 110 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 MIR628-201ENST00000385229 95 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 RNU7-4P-201ENST00000516961 62 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 AC120024.2-201ENST00000576526 175 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 MIR4723-201ENST00000585070 81 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 RNU6-90P-201ENST00000606352 106 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 SNORD113-5-201ENST00000607261 78 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 AL132765.2-201ENST00000610812 351 ntBASIC-3.09□□□□□ -2.9
AP4S1Q9Y587 MIR203A-201ENST00000384836 110 ntBASIC-3.1□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.1□□□□□ -2.91
AP4S1Q9Y587 SNORD116-25-201ENST00000516517 92 ntBASIC-3.1□□□□□ -2.91
AP4S1Q9Y587 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.1□□□□□ -2.91
AP4S1Q9Y587 AC092794.1-201ENST00000612734 582 ntBASIC-3.1□□□□□ -2.91
AP4S1Q9Y587 snoU2_19.4-201ENST00000364329 80 ntBASIC-3.11□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.315-201ENST00000365117 102 ntBASIC-3.11□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.11□□□□□ -2.91
AP4S1Q9Y587 AF246928.1-201ENST00000623768 87 ntBASIC-3.11□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 RNU6-593P-201ENST00000364716 112 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 SNORA79-201ENST00000408376 140 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 AL445567.1-201ENST00000439121 144 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 SEPT14P3-201ENST00000439401 183 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 AL732372.2-207ENST00000445840 183 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 SEPT14P2-201ENST00000453405 183 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 FO082796.1-201ENST00000523795 183 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 snoU18.1-201ENST00000629629 71 ntBASIC-3.12□□□□□ -2.91
AP4S1Q9Y587 RNU6-478P-201ENST00000363904 110 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 RNU6-1090P-201ENST00000364065 94 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.13□□□□□ -2.91
AP4S1Q9Y587 AC096644.2-201ENST00000429278 159 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms