Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR3122-201ENST00000577243 73 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
NUCKS1Q9H1E3 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
NUCKS1Q9H1E3 SNORA24B-201ENST00000384176 131 ntBASIC2.13□□□□□ -2.07
NUCKS1Q9H1E3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NUCKS1Q9H1E3 U6.81-201ENST00000612550 106 ntBASIC2.13□□□□□ -2.07
NUCKS1Q9H1E3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.13□□□□□ -2.07
NUCKS1Q9H1E3 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
NUCKS1Q9H1E3 SNORD45A-201ENST00000384512 84 ntBASIC2.12□□□□□ -2.07
NUCKS1Q9H1E3 AC093423.1-201ENST00000440817 142 ntBASIC2.12□□□□□ -2.07
NUCKS1Q9H1E3 AC097510.1-201ENST00000510945 133 ntBASIC2.12□□□□□ -2.07
NUCKS1Q9H1E3 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.12□□□□□ -2.07
NUCKS1Q9H1E3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-824P-201ENST00000363724 104 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 MIR9-2-201ENST00000384838 87 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-630P-201ENST00000391258 106 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-935P-201ENST00000410371 100 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 SNORD83.1-201ENST00000411362 77 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 snoU13.15-201ENST00000459407 104 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-765P-201ENST00000516916 99 ntBASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NUCKS1Q9H1E3 SNORD114-1-201ENST00000362705 72 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-895P-201ENST00000384125 103 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 MIR599-201ENST00000385069 95 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-1052P-201ENST00000411398 104 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-719P-201ENST00000516671 104 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 MIR8074-201ENST00000615081 81 ntBASIC2.1□□□□□ -2.07
NUCKS1Q9H1E3 MIR451A-201ENST00000385059 72 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 snoU13.26-201ENST00000459452 105 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 RNU6-1265P-201ENST00000516342 103 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 MIR8063-201ENST00000621930 81 ntBASIC2.09□□□□□ -2.07
NUCKS1Q9H1E3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 SNORD45.1-201ENST00000363181 77 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 SNORA25.4-201ENST00000363666 124 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 SNORD115-22-201ENST00000364456 82 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 Y_RNA.443-201ENST00000384135 111 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 MTND4LP19-201ENST00000403051 166 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 RNU6-881P-201ENST00000516813 102 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 AC138907.6-201ENST00000568401 126 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 AC138869.1-201ENST00000568623 124 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.08□□□□□ -2.08
NUCKS1Q9H1E3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUCKS1Q9H1E3 MIR8053-201ENST00000613344 75 ntBASIC2.07□□□□□ -2.08
NUCKS1Q9H1E3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUCKS1Q9H1E3 MIR302D-201ENST00000362275 68 ntBASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 RNU6-987P-201ENST00000384759 104 ntBASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 MIR125B2-201ENST00000385128 89 ntBASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NUCKS1Q9H1E3 RNU6-934P-201ENST00000365154 107 ntBASIC2.05□□□□□ -2.08
NUCKS1Q9H1E3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
NUCKS1Q9H1E3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
NUCKS1Q9H1E3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 RNA5SP245-201ENST00000364239 121 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 SNORD116-24-201ENST00000384549 92 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 RNU4-37P-201ENST00000410214 84 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 RNU6-165P-201ENST00000517170 99 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 AC019176.1-201ENST00000518519 225 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 MIR4771-2-201ENST00000577758 74 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 MIR3664-201ENST00000579074 99 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 MIR4771-1-201ENST00000582617 74 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 AL645939.4-201ENST00000604495 135 ntBASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NUCKS1Q9H1E3 SNORD113.3-201ENST00000364630 78 ntBASIC2.03□□□□□ -2.08
NUCKS1Q9H1E3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUCKS1Q9H1E3 RNU6-604P-201ENST00000390917 100 ntBASIC2.03□□□□□ -2.08
NUCKS1Q9H1E3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUCKS1Q9H1E3 SNORD113.1-201ENST00000363280 73 ntBASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 SNORD1A-201ENST00000364968 72 ntBASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-1177P-201ENST00000391058 104 ntBASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 AC036111.3-201ENST00000526389 112 ntBASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-1216P-201ENST00000362590 107 ntBASIC2.01□□□□□ -2.09
NUCKS1Q9H1E3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.01□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-535P-201ENST00000384722 107 ntBASIC2.01□□□□□ -2.09
NUCKS1Q9H1E3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.01□□□□□ -2.09
NUCKS1Q9H1E3 MIR4773-1-201ENST00000637203 78 ntBASIC2.01□□□□□ -2.09
NUCKS1Q9H1E3 Y_RNA.258-201ENST00000364613 105 ntBASIC2□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-499P-201ENST00000365615 107 ntBASIC2□□□□□ -2.09
NUCKS1Q9H1E3 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
NUCKS1Q9H1E3 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
NUCKS1Q9H1E3 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-274P-201ENST00000459566 107 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 AC079140.2-201ENST00000506193 142 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-287P-201ENST00000516230 98 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.99□□□□□ -2.09
NUCKS1Q9H1E3 MIR4511-201ENST00000582784 87 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms