Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 SNORD115-22-201ENST00000364456 82 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 SNORD115-17-201ENST00000364612 82 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 MIR206-201ENST00000384872 86 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 MIR1270-201ENST00000459320 83 ntBASIC-1.73□□□□□ -2.69
TRIM4Q9C037 SNORD115-33-201ENST00000363723 82 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 AC108019.1-201ENST00000512540 175 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 MIR4756-201ENST00000577874 78 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.74□□□□□ -2.69
TRIM4Q9C037 TRDV1-202ENST00000621643 102 ntBASIC-1.74□□□□□ -2.69
TRIM4Q9C037 MIR335-201ENST00000362173 94 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 RNA5SP93-201ENST00000362525 114 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 RNU4-90P-201ENST00000362773 141 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 MIR516A2-201ENST00000384888 90 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 MIR516A1-201ENST00000385033 90 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 SNORD75.2-201ENST00000408784 58 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 MIR548O2-201ENST00000616090 70 ntBASIC-1.75□□□□□ -2.69
TRIM4Q9C037 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 SNORD114-4-201ENST00000363962 75 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 RNU6-312P-201ENST00000364629 107 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 RNU6-54P-201ENST00000365563 107 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 AL161932.1-201ENST00000437408 146 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 RNU6-850P-201ENST00000516934 103 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 SNORD116.3-201ENST00000517176 78 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 MIR4760-201ENST00000585040 80 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 U6.100-201ENST00000636230 99 ntBASIC-1.76□□□□□ -2.69
TRIM4Q9C037 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 MIR548H3-201ENST00000408771 118 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 AC113618.1-201ENST00000416747 285 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 SNORA40.14-201ENST00000516543 86 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 RNU6-118P-201ENST00000516552 102 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 RNU6-453P-201ENST00000516819 85 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 AL138825.1-201ENST00000618587 192 ntBASIC-1.77□□□□□ -2.69
TRIM4Q9C037 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.78□□□□□ -2.69
TRIM4Q9C037 RNU6-472P-201ENST00000384299 107 ntBASIC-1.78□□□□□ -2.69
TRIM4Q9C037 RNU6-168P-201ENST00000516189 101 ntBASIC-1.78□□□□□ -2.69
TRIM4Q9C037 AC084781.2-201ENST00000615568 161 ntBASIC-1.78□□□□□ -2.69
TRIM4Q9C037 MIR3688-2-201ENST00000636963 87 ntBASIC-1.78□□□□□ -2.69
TRIM4Q9C037 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 SNORD115-27-201ENST00000364430 82 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 AL353691.2-201ENST00000443795 59 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 SNORA20.3-201ENST00000516880 132 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.79□□□□□ -2.7
TRIM4Q9C037 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 AC108081.1-201ENST00000604358 221 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 MIR376A1-201ENST00000616574 68 ntBASIC-1.79□□□□□ -2.7
TRIM4Q9C037 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.8□□□□□ -2.7
TRIM4Q9C037 SNORA79-201ENST00000408376 140 ntBASIC-1.8□□□□□ -2.7
TRIM4Q9C037 MTND4LP30-201ENST00000454092 297 ntBASIC-1.8□□□□□ -2.7
TRIM4Q9C037 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.8□□□□□ -2.7
TRIM4Q9C037 AC087741.2-201ENST00000619415 172 ntBASIC-1.8□□□□□ -2.7
TRIM4Q9C037 SNORA25.1-201ENST00000362326 128 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 MIR616-201ENST00000385293 97 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 RNU6-561P-201ENST00000516222 102 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 AC022079.1-201ENST00000621546 602 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 AC090617.8-201ENST00000623339 167 ntBASIC-1.81□□□□□ -2.7
TRIM4Q9C037 RNU6-924P-201ENST00000362926 108 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 AC090616.4-201ENST00000448026 115 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 RNU7-2P-201ENST00000516096 62 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 RNU2-35P-201ENST00000516446 142 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 AP002795.1-201ENST00000534879 84 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 RNU2-4P-201ENST00000606190 192 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 SNORD58B-201ENST00000607313 66 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 MIR376B-201ENST00000614515 100 ntBASIC-1.82□□□□□ -2.7
TRIM4Q9C037 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 SNORD27-201ENST00000363981 72 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 RNU4-17P-201ENST00000365598 141 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 RNU6-211P-201ENST00000384047 107 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 MIR624-201ENST00000385217 97 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 RNU4-69P-201ENST00000410677 143 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 FGF7P4-201ENST00000509595 295 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 MIR664B-201ENST00000626756 61 ntBASIC-1.83□□□□□ -2.7
TRIM4Q9C037 AL606534.2-204ENST00000635008 178 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms