Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MIR548AG2-201ENST00000581228 64 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR3920-201ENST00000581751 86 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 U6.59-201ENST00000615686 107 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 uc_338.16-201ENST00000621804 95 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 FO624990.1-201ENST00000636373 85 ntBASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRTAP3-1Q9BYR8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 HMGN2P19-201ENST00000425149 265 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 AC079150.2-201ENST00000443733 78 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 RNA5SP233-201ENST00000459153 113 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-542P-201ENST00000516405 103 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU7-161P-201ENST00000517289 62 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR4446-201ENST00000578505 67 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR548O2-201ENST00000616090 70 ntBASIC1.25□□□□□ -2.21
KRTAP3-1Q9BYR8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 Y_RNA.510-201ENST00000384511 114 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR633-201ENST00000384821 98 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU1-78P-201ENST00000391248 165 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU7-74P-201ENST00000459104 62 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-135P-201ENST00000516769 101 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 NAMPTP3-201ENST00000569273 224 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR6075-201ENST00000620782 95 ntBASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP3-1Q9BYR8 Y_RNA.375-201ENST00000365625 101 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR7-2-201ENST00000384970 110 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR670-201ENST00000390142 98 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 RPL23AP42-201ENST00000471152 471 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 AC008834.1-201ENST00000511612 175 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR4429-201ENST00000580105 73 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR4325-201ENST00000583049 90 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 AC067863.3-201ENST00000624172 122 ntBASIC1.23□□□□□ -2.21
KRTAP3-1Q9BYR8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 RNU6-54P-201ENST00000365563 107 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR203A-201ENST00000384836 110 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR519E-201ENST00000385075 84 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR27B-201ENST00000385129 97 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR221-201ENST00000385135 110 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 MIR1827-201ENST00000408549 66 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
KRTAP3-1Q9BYR8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-645P-201ENST00000364649 106 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 AC104435.1-201ENST00000483483 166 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 RNA5SP320-201ENST00000516263 124 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 MIR3657-201ENST00000584818 117 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 AL049779.4-201ENST00000604500 156 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 AC007179.3-201ENST00000604976 235 ntBASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORA2.1-201ENST00000363089 137 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-1335P-201ENST00000365426 107 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNA5SP171-201ENST00000391071 115 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNA5SP489-201ENST00000410986 109 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 AL356379.1-201ENST00000414105 126 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORD109B-201ENST00000458961 67 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORD109A-201ENST00000459128 67 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 AC026436.1-201ENST00000510537 270 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-469P-201ENST00000516253 101 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 AL136317.1-201ENST00000612653 226 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP3-1Q9BYR8 ZNF355P-201ENST00000427301 3216 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-940P-201ENST00000363433 104 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORA25.5-201ENST00000363782 126 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6V-201ENST00000384105 107 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 MIR676-201ENST00000390702 67 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 MIR548L-201ENST00000408303 86 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU1-40P-201ENST00000516816 164 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU1-97P-201ENST00000516872 164 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 AL033523.1-201ENST00000605153 153 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 AC092634.7-201ENST00000621022 103 ntBASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP3-1Q9BYR8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-859P-201ENST00000362728 107 ntBASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 RNU6-260P-201ENST00000384092 107 ntBASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 COTL1P1-201ENST00000422309 375 ntBASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 SCARNA21.1-201ENST00000515996 128 ntBASIC1.18□□□□□ -2.22
KRTAP3-1Q9BYR8 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms