Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 RNU6-664P-201ENST00000362381 107 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 RNU4-17P-201ENST00000365598 141 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 MIR4696-201ENST00000581431 70 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 MIR4306-201ENST00000583390 91 ntBASIC-1.43□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 SNORD115-23-201ENST00000364461 82 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 RNU4-24P-201ENST00000364565 139 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 RNU6-450P-201ENST00000364654 107 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 RNU6-935P-201ENST00000410371 100 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 RNU6-651P-201ENST00000411040 105 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 SNORA40.15-201ENST00000516884 107 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 AC073869.6-201ENST00000640656 341 ntBASIC-1.44□□□□□ -2.64
LYSMD1Q96S90 SNORA63.7-201ENST00000365579 123 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 MIR451A-201ENST00000385059 72 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 RNU6-466P-201ENST00000391224 103 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 MIR1302-11-201ENST00000408051 138 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 MIR1302-9-201ENST00000408365 138 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 MIR1302-10-201ENST00000408734 138 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 SNORD42B-201ENST00000458893 67 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 MIR1302-2-201ENST00000607096 138 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 AC092794.1-201ENST00000612734 582 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 AL365265.1-201ENST00000621045 234 ntBASIC-1.45□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.46□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.46□□□□□ -2.64
LYSMD1Q96S90 RNU6-337P-201ENST00000391243 106 ntBASIC-1.46□□□□□ -2.64
LYSMD1Q96S90 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.46□□□□□ -2.64
LYSMD1Q96S90 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.46□□□□□ -2.64
LYSMD1Q96S90 RNU6-208P-201ENST00000362431 107 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 RNU6-103P-201ENST00000363686 107 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 SNORA63.6-201ENST00000364921 119 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 SNORA62.4-201ENST00000365504 151 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 RNU6-976P-201ENST00000516086 111 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 RNU6-521P-201ENST00000516663 105 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 MIR4744-201ENST00000581563 82 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 AC132825.6-201ENST00000638861 357 ntBASIC-1.47□□□□□ -2.64
LYSMD1Q96S90 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.48□□□□□ -2.65
LYSMD1Q96S90 RNY3P15-201ENST00000516297 97 ntBASIC-1.48□□□□□ -2.65
LYSMD1Q96S90 RNU6-706P-201ENST00000517229 104 ntBASIC-1.48□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RNU6-643P-201ENST00000384018 107 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RNU6-876P-201ENST00000391295 104 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 SNORD2.1-201ENST00000458762 69 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RNU6-720P-201ENST00000516363 108 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 AP002392.1-201ENST00000537692 208 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 MIR1302-1-201ENST00000637932 143 ntBASIC-1.49□□□□□ -2.65
LYSMD1Q96S90 RNU6-806P-201ENST00000365147 105 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 SNORD116-2-201ENST00000384274 95 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 MTND5P22-201ENST00000458380 195 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 RNU7-152P-201ENST00000458982 64 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 RNY4P20-201ENST00000516678 93 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 AC080013.6-201ENST00000606185 215 ntBASIC-1.5□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 RNU6-578P-201ENST00000390980 103 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 MTATP6P21-201ENST00000440681 189 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 RNU6-277P-201ENST00000516272 106 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 RNU7-6P-201ENST00000516845 62 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 AC068339.1-201ENST00000526965 141 ntBASIC-1.51□□□□□ -2.65
LYSMD1Q96S90 RNU6-235P-201ENST00000362644 107 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 RNU6-823P-201ENST00000391042 103 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 RNA5SP461-201ENST00000516451 104 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 RNU6-719P-201ENST00000516671 104 ntBASIC-1.52□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 RNU6-770P-201ENST00000363929 105 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 MIR1252-201ENST00000408861 65 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 RNU4-61P-201ENST00000411243 107 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 ELOCP20-201ENST00000422460 345 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 RNU7-134P-201ENST00000458997 64 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 AC021146.9-201ENST00000512503 156 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 FGF7P7-201ENST00000514120 227 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 RNU6-479P-201ENST00000516348 105 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 U6.96-201ENST00000636425 70 ntBASIC-1.53□□□□□ -2.65
LYSMD1Q96S90 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.54□□□□□ -2.66
LYSMD1Q96S90 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.54□□□□□ -2.66
LYSMD1Q96S90 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.54□□□□□ -2.66
LYSMD1Q96S90 RNU6-647P-201ENST00000364243 107 ntBASIC-1.54□□□□□ -2.66
LYSMD1Q96S90 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms