Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR616-201ENST00000385293 97 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 RNU6-561P-201ENST00000516222 102 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 SNORD116-25-201ENST00000516517 92 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 MIR507-201ENST00000385234 94 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 HSPE1P25-201ENST00000455484 251 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 RPS29P30-201ENST00000600975 111 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 AC108081.1-201ENST00000604358 221 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 AC090617.8-201ENST00000623339 167 ntBASIC-2.61□□□□□ -2.83
HIST1H1AQ02539 MIR335-201ENST00000362173 94 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 RNU6-228P-201ENST00000362700 106 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 SNORD113-8-201ENST00000363497 74 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 RNU6-978P-201ENST00000364371 103 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 FGF7P6-202ENST00000451282 293 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 RNU6-720P-201ENST00000516363 108 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 MIR4272-201ENST00000635924 64 ntBASIC-2.62□□□□□ -2.83
HIST1H1AQ02539 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 RNU6-890P-201ENST00000384121 107 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 DEFB108C-201ENST00000400154 252 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 RNU7-164P-201ENST00000459221 62 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 AP002392.1-201ENST00000537692 208 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 AC119751.7-201ENST00000600494 245 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.63□□□□□ -2.83
HIST1H1AQ02539 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 SNORD115-27-201ENST00000364430 82 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 SNORD115-22-201ENST00000364456 82 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 RNU6-310P-201ENST00000384655 107 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 AL353691.2-201ENST00000443795 59 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 AC021443.1-201ENST00000604478 211 ntBASIC-2.64□□□□□ -2.83
HIST1H1AQ02539 RNU6-119P-201ENST00000364882 107 ntBASIC-2.65□□□□□ -2.83
HIST1H1AQ02539 SNORD75.2-201ENST00000408784 58 ntBASIC-2.65□□□□□ -2.83
HIST1H1AQ02539 RNU4-43P-201ENST00000410628 137 ntBASIC-2.65□□□□□ -2.83
HIST1H1AQ02539 RNU7-123P-201ENST00000515911 60 ntBASIC-2.65□□□□□ -2.83
HIST1H1AQ02539 RNU4-90P-201ENST00000362773 141 ntBASIC-2.66□□□□□ -2.84
HIST1H1AQ02539 RNU6-510P-201ENST00000391239 108 ntBASIC-2.66□□□□□ -2.84
HIST1H1AQ02539 AC138907.4-201ENST00000570107 226 ntBASIC-2.66□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.67□□□□□ -2.84
HIST1H1AQ02539 MTND4LP30-201ENST00000454092 297 ntBASIC-2.67□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.67□□□□□ -2.84
HIST1H1AQ02539 AC109635.3-201ENST00000529536 185 ntBASIC-2.67□□□□□ -2.84
HIST1H1AQ02539 AP000720.1-201ENST00000625091 483 ntBASIC-2.67□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 RNA5SP236-201ENST00000516169 116 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 AC006362.1-201ENST00000567392 174 ntBASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.68□□□□□ -2.84
HIST1H1AQ02539 RNU6-211P-201ENST00000384047 107 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 RNU6-130P-201ENST00000411112 103 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 AC108019.1-201ENST00000512540 175 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 RNU6-240P-201ENST00000516098 97 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.69□□□□□ -2.84
HIST1H1AQ02539 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 UBE2WP1-201ENST00000362030 340 ntBASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 RNU6-990P-201ENST00000364385 104 ntBASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 AC103591.3-201ENST00000608684 209 ntBASIC-2.7□□□□□ -2.84
HIST1H1AQ02539 SNORA25.1-201ENST00000362326 128 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 SNORD115-19-201ENST00000363098 82 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 SNORD115-18-201ENST00000363293 82 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 SNORD115-17-201ENST00000364612 82 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU6-168P-201ENST00000516189 101 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU6-719P-201ENST00000516671 104 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.71□□□□□ -2.84
HIST1H1AQ02539 RNU4-17P-201ENST00000365598 141 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 MIR559-201ENST00000385188 96 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 RNU4-14P-201ENST00000410858 122 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 AC113618.1-201ENST00000416747 285 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.72□□□□□ -2.84
HIST1H1AQ02539 RNU6-495P-201ENST00000362995 107 ntBASIC-2.73□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.73□□□□□ -2.85
HIST1H1AQ02539 RNU6-699P-201ENST00000517081 110 ntBASIC-2.73□□□□□ -2.85
HIST1H1AQ02539 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.73□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 RNY1P11-201ENST00000363759 113 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 RNU6-80P-201ENST00000384195 107 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 RNU6-400P-201ENST00000391173 106 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 RNU6-521P-201ENST00000516663 105 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 MIR5690-201ENST00000583739 73 ntBASIC-2.74□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.75□□□□□ -2.85
HIST1H1AQ02539 MIR1255B2-201ENST00000408618 67 ntBASIC-2.75□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms