Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORA2.1-201ENST00000363089 137 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 SNORA62.4-201ENST00000365504 151 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 AL078595.1-201ENST00000404458 226 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 RNU4-69P-201ENST00000410677 143 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 RNU6-850P-201ENST00000516934 103 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 AC068339.1-201ENST00000526965 141 ntBASIC-1.62□□□□□ -2.67
NUP98P52948 MIR548H3-201ENST00000408771 118 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 RNU6-118P-201ENST00000516552 102 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 RNU6-980P-201ENST00000516925 103 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 AC022079.1-201ENST00000621546 602 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 UBE2WP1-201ENST00000362030 340 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 RNU6-412P-201ENST00000516434 106 ntBASIC-1.63□□□□□ -2.67
NUP98P52948 MIR559-201ENST00000385188 96 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 MIR616-201ENST00000385293 97 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 SNORD115-46-201ENST00000390982 71 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 RNU2-16P-201ENST00000410712 136 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 RNU2-35P-201ENST00000516446 142 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 SNORA20.3-201ENST00000516880 132 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 MIR376B-201ENST00000614515 100 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 U6.100-201ENST00000636230 99 ntBASIC-1.64□□□□□ -2.67
NUP98P52948 SNORD115-27-201ENST00000364430 82 ntBASIC-1.65□□□□□ -2.67
NUP98P52948 RNU6-690P-201ENST00000365242 106 ntBASIC-1.65□□□□□ -2.67
NUP98P52948 RNU6-662P-201ENST00000384253 104 ntBASIC-1.65□□□□□ -2.67
NUP98P52948 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.65□□□□□ -2.67
NUP98P52948 RNU6-592P-201ENST00000411333 103 ntBASIC-1.65□□□□□ -2.67
NUP98P52948 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.65□□□□□ -2.67
NUP98P52948 SNORD27-201ENST00000363981 72 ntBASIC-1.66□□□□□ -2.67
NUP98P52948 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.66□□□□□ -2.67
NUP98P52948 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.66□□□□□ -2.67
NUP98P52948 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.66□□□□□ -2.67
NUP98P52948 MIR6773-201ENST00000612812 74 ntBASIC-1.66□□□□□ -2.67
NUP98P52948 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.66□□□□□ -2.68
NUP98P52948 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.66□□□□□ -2.68
NUP98P52948 SNORD115-23-201ENST00000364461 82 ntBASIC-1.66□□□□□ -2.68
NUP98P52948 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 MIR548E-201ENST00000408287 88 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 AC082651.2-201ENST00000496833 166 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 RNU6-561P-201ENST00000516222 102 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 AC021443.1-201ENST00000604478 211 ntBASIC-1.67□□□□□ -2.68
NUP98P52948 SNORD115-33-201ENST00000363723 82 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNA5SP86-201ENST00000390869 98 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 SNORD54-201ENST00000459159 67 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 MIR548O2-201ENST00000616090 70 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 AC002553.4-201ENST00000616896 331 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-208P-201ENST00000362431 107 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-924P-201ENST00000362926 108 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-211P-201ENST00000384047 107 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-472P-201ENST00000384299 107 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 RNU4-43P-201ENST00000410628 137 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.68□□□□□ -2.68
NUP98P52948 MTND4P17-201ENST00000470444 350 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 AC097510.1-201ENST00000510945 133 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 SNORD63.1-201ENST00000516178 80 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.68□□□□□ -2.68
NUP98P52948 AC084782.3-201ENST00000612282 578 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 MIR664B-201ENST00000626756 61 ntBASIC-1.68□□□□□ -2.68
NUP98P52948 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.69□□□□□ -2.68
NUP98P52948 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.69□□□□□ -2.68
NUP98P52948 AC138907.4-201ENST00000570107 226 ntBASIC-1.69□□□□□ -2.68
NUP98P52948 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.69□□□□□ -2.68
NUP98P52948 MIR4490-201ENST00000582647 84 ntBASIC-1.69□□□□□ -2.68
NUP98P52948 SNORD81.2-201ENST00000365153 76 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 RNU6-746P-201ENST00000384112 109 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 SNORD116-1-201ENST00000384335 95 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 SNORD38.2-201ENST00000384470 69 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 SNORD116-6-201ENST00000384711 96 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 MIR507-201ENST00000385234 94 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 SNORD75.2-201ENST00000408784 58 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 RNU6-559P-201ENST00000516151 98 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 RNA5SP26-201ENST00000362406 119 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 RNU6-326P-201ENST00000365480 107 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 SNORD77B-201ENST00000391112 67 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 U4.5-201ENST00000617137 123 ntBASIC-1.7□□□□□ -2.68
NUP98P52948 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
NUP98P52948 SNORA63.7-201ENST00000365579 123 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 AC018880.2-201ENST00000414265 201 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 SNORD116.3-201ENST00000517176 78 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 MIR3139-201ENST00000579145 76 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 RNU2-4P-201ENST00000606190 192 ntBASIC-1.71□□□□□ -2.68
NUP98P52948 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 RNU6-102P-201ENST00000384485 104 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 AC108019.1-201ENST00000512540 175 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 AC087741.2-201ENST00000619415 172 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 MIR6874-201ENST00000635894 71 ntBASIC-1.72□□□□□ -2.68
NUP98P52948 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms