Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RNF144AP50876 MIR8053-201ENST00000613344 75 ntBASIC2.06□□□□□ -2.08
RNF144AP50876 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.06□□□□□ -2.08
RNF144AP50876 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RNF144AP50876 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RNF144AP50876 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
RNF144AP50876 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF144AP50876 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
RNF144AP50876 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
RNF144AP50876 AL645939.4-201ENST00000604495 135 ntBASIC2.05□□□□□ -2.08
RNF144AP50876 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.05□□□□□ -2.08
RNF144AP50876 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RNF144AP50876 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF144AP50876 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.04□□□□□ -2.08
RNF144AP50876 RNA5SP245-201ENST00000364239 121 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 RNU6-364P-201ENST00000384387 107 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 RNU6-1265P-201ENST00000516342 103 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RNF144AP50876 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.04□□□□□ -2.08
RNF144AP50876 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
RNF144AP50876 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 MIR2113-201ENST00000459007 91 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 AC048334.1-201ENST00000477975 159 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RN7SL429P-201ENST00000479090 223 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RN7SL489P-201ENST00000486185 223 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RN7SL327P-201ENST00000488659 223 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RNU6-881P-201ENST00000516813 102 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 MIR3945-201ENST00000581853 98 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 MIR5007-201ENST00000583098 95 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 RN7SL853P-201ENST00000617250 223 ntBASIC2.03□□□□□ -2.08
RNF144AP50876 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RNF144AP50876 SNORD111-201ENST00000408139 94 ntBASIC2.02□□□□□ -2.09
RNF144AP50876 RPS26P5-201ENST00000418544 335 ntBASIC2.02□□□□□ -2.09
RNF144AP50876 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
RNF144AP50876 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.02□□□□□ -2.09
RNF144AP50876 MIR4676-201ENST00000583078 72 ntBASIC2.02□□□□□ -2.09
RNF144AP50876 SNORD115-22-201ENST00000364456 82 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RNF144AP50876 RNU6-1177P-201ENST00000391058 104 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 AL512310.8-201ENST00000550183 120 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 AC008608.1-201ENST00000603910 127 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 MIR4773-1-201ENST00000637203 78 ntBASIC2.01□□□□□ -2.09
RNF144AP50876 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF144AP50876 SNORA25.4-201ENST00000363666 124 ntBASIC2□□□□□ -2.09
RNF144AP50876 Y_RNA.443-201ENST00000384135 111 ntBASIC2□□□□□ -2.09
RNF144AP50876 SNORA75.2-201ENST00000391138 150 ntBASIC2□□□□□ -2.09
RNF144AP50876 SNORA75.3-201ENST00000391231 150 ntBASIC2□□□□□ -2.09
RNF144AP50876 RNU1-41P-201ENST00000516161 162 ntBASIC2□□□□□ -2.09
RNF144AP50876 RNU6-287P-201ENST00000516230 98 ntBASIC2□□□□□ -2.09
RNF144AP50876 RNU7-40P-201ENST00000516397 64 ntBASIC2□□□□□ -2.09
RNF144AP50876 RNU1-48P-201ENST00000516400 162 ntBASIC2□□□□□ -2.09
RNF144AP50876 AC023827.1-201ENST00000569247 97 ntBASIC2□□□□□ -2.09
RNF144AP50876 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2□□□□□ -2.09
RNF144AP50876 AC027335.2-201ENST00000624030 375 ntBASIC2□□□□□ -2.09
RNF144AP50876 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF144AP50876 MIR9-2-201ENST00000384838 87 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 U3.27-201ENST00000391237 200 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 MIR938-201ENST00000401216 83 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 RNU6-274P-201ENST00000459566 107 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 AC106800.4-201ENST00000614905 153 ntBASIC1.99□□□□□ -2.09
RNF144AP50876 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF144AP50876 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF144AP50876 RNU6-1216P-201ENST00000362590 107 ntBASIC1.98□□□□□ -2.09
RNF144AP50876 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
RNF144AP50876 RNU7-102P-201ENST00000458948 62 ntBASIC1.98□□□□□ -2.09
RNF144AP50876 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.98□□□□□ -2.09
RNF144AP50876 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
RNF144AP50876 SNORD113.1-201ENST00000363280 73 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 RNU6-604P-201ENST00000390917 100 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 RNA5SP425-201ENST00000410336 112 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 SNORA31.2-201ENST00000516019 134 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 RN7SKP88-201ENST00000516847 250 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 7SK.8-201ENST00000612110 250 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 7SK.11-201ENST00000615477 250 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 7SK.13-201ENST00000622040 250 ntBASIC1.97□□□□□ -2.09
RNF144AP50876 RNU6-382P-201ENST00000365181 106 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 SNORA70B-201ENST00000384210 135 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 MTND4LP19-201ENST00000403051 166 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 AC244505.6-201ENST00000452829 130 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 AL078603.1-201ENST00000603824 313 ntBASIC1.96□□□□□ -2.1
RNF144AP50876 SNORD115-44-201ENST00000365391 82 ntBASIC1.95□□□□□ -2.1
RNF144AP50876 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
RNF144AP50876 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.94□□□□□ -2.1
RNF144AP50876 AL591704.2-201ENST00000421658 181 ntBASIC1.94□□□□□ -2.1
RNF144AP50876 AC244098.3-201ENST00000424803 96 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms