Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SNORD101-201ENST00000384027 73 ntBASIC1.64□□□□□ -2.15
GDNFP39905 MIR125B2-201ENST00000385128 89 ntBASIC1.64□□□□□ -2.15
GDNFP39905 RPS27P16-201ENST00000425758 201 ntBASIC1.64□□□□□ -2.15
GDNFP39905 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
GDNFP39905 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
GDNFP39905 Y_RNA.42-201ENST00000362660 108 ntBASIC1.63□□□□□ -2.15
GDNFP39905 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
GDNFP39905 RNU6-330P-201ENST00000363015 107 ntBASIC1.63□□□□□ -2.15
GDNFP39905 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
GDNFP39905 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
GDNFP39905 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
GDNFP39905 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
GDNFP39905 RNU6-765P-201ENST00000516916 99 ntBASIC1.63□□□□□ -2.15
GDNFP39905 RNU7-156P-201ENST00000517214 74 ntBASIC1.63□□□□□ -2.15
GDNFP39905 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
GDNFP39905 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
GDNFP39905 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
GDNFP39905 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
GDNFP39905 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GDNFP39905 MIR504-201ENST00000385065 83 ntBASIC1.62□□□□□ -2.15
GDNFP39905 MIR599-201ENST00000385069 95 ntBASIC1.62□□□□□ -2.15
GDNFP39905 RNU6-587P-201ENST00000391282 106 ntBASIC1.62□□□□□ -2.15
GDNFP39905 Y_RNA.596-201ENST00000410462 109 ntBASIC1.62□□□□□ -2.15
GDNFP39905 AC097635.1-201ENST00000450678 155 ntBASIC1.62□□□□□ -2.15
GDNFP39905 RNU6-634P-201ENST00000459134 106 ntBASIC1.62□□□□□ -2.15
GDNFP39905 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
GDNFP39905 AC023827.1-201ENST00000569247 97 ntBASIC1.62□□□□□ -2.15
GDNFP39905 MIR6715A-201ENST00000615929 79 ntBASIC1.62□□□□□ -2.15
GDNFP39905 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.62□□□□□ -2.15
GDNFP39905 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
GDNFP39905 RNA5SP245-201ENST00000364239 121 ntBASIC1.61□□□□□ -2.15
GDNFP39905 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
GDNFP39905 RNY4P3-201ENST00000365254 95 ntBASIC1.61□□□□□ -2.15
GDNFP39905 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
GDNFP39905 SNORA31.2-201ENST00000516019 134 ntBASIC1.61□□□□□ -2.15
GDNFP39905 AC138907.6-201ENST00000568401 126 ntBASIC1.61□□□□□ -2.15
GDNFP39905 AC138869.1-201ENST00000568623 124 ntBASIC1.61□□□□□ -2.15
GDNFP39905 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
GDNFP39905 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
GDNFP39905 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
GDNFP39905 Y_RNA.363-201ENST00000365529 113 ntBASIC1.6□□□□□ -2.15
GDNFP39905 SNORA8.1-201ENST00000384250 140 ntBASIC1.6□□□□□ -2.15
GDNFP39905 RNU6-1052P-201ENST00000411398 104 ntBASIC1.6□□□□□ -2.15
GDNFP39905 RPS26P5-201ENST00000418544 335 ntBASIC1.6□□□□□ -2.15
GDNFP39905 RNU7-40P-201ENST00000516397 64 ntBASIC1.6□□□□□ -2.15
GDNFP39905 RNU6-719P-201ENST00000516671 104 ntBASIC1.6□□□□□ -2.15
GDNFP39905 MIR4676-201ENST00000583078 72 ntBASIC1.6□□□□□ -2.15
GDNFP39905 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
GDNFP39905 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
GDNFP39905 Y_RNA.36-201ENST00000362602 112 ntBASIC1.59□□□□□ -2.15
GDNFP39905 SNORD114-1-201ENST00000362705 72 ntBASIC1.59□□□□□ -2.15
GDNFP39905 RNU6-340P-201ENST00000364005 107 ntBASIC1.59□□□□□ -2.15
GDNFP39905 RNU6-154P-201ENST00000384306 106 ntBASIC1.59□□□□□ -2.15
GDNFP39905 RNU6-535P-201ENST00000384722 107 ntBASIC1.59□□□□□ -2.15
GDNFP39905 RN7SKP88-201ENST00000516847 250 ntBASIC1.59□□□□□ -2.15
GDNFP39905 MTRNR2L2-201ENST00000604882 87 ntBASIC1.59□□□□□ -2.15
GDNFP39905 7SK.8-201ENST00000612110 250 ntBASIC1.59□□□□□ -2.15
GDNFP39905 7SK.11-201ENST00000615477 250 ntBASIC1.59□□□□□ -2.15
GDNFP39905 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.59□□□□□ -2.15
GDNFP39905 7SK.13-201ENST00000622040 250 ntBASIC1.59□□□□□ -2.15
GDNFP39905 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
GDNFP39905 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
GDNFP39905 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.58□□□□□ -2.16
GDNFP39905 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
GDNFP39905 RNU6-364P-201ENST00000384387 107 ntBASIC1.58□□□□□ -2.16
GDNFP39905 RNU6-649P-201ENST00000384463 107 ntBASIC1.58□□□□□ -2.16
GDNFP39905 RNU6-1241P-201ENST00000384536 107 ntBASIC1.58□□□□□ -2.16
GDNFP39905 RNU6-291P-201ENST00000384720 107 ntBASIC1.58□□□□□ -2.16
GDNFP39905 MIR154-201ENST00000385243 84 ntBASIC1.58□□□□□ -2.16
GDNFP39905 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
GDNFP39905 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
GDNFP39905 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
GDNFP39905 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
GDNFP39905 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
GDNFP39905 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
GDNFP39905 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.58□□□□□ -2.16
GDNFP39905 AC106800.4-201ENST00000614905 153 ntBASIC1.58□□□□□ -2.16
GDNFP39905 Y_RNA.340-201ENST00000365330 92 ntBASIC1.57□□□□□ -2.16
GDNFP39905 RNU6-540P-201ENST00000384622 101 ntBASIC1.57□□□□□ -2.16
GDNFP39905 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
GDNFP39905 SNORD30.1-201ENST00000391309 70 ntBASIC1.57□□□□□ -2.16
GDNFP39905 MIR942-201ENST00000401111 86 ntBASIC1.57□□□□□ -2.16
GDNFP39905 AC125388.1-201ENST00000459631 156 ntBASIC1.57□□□□□ -2.16
GDNFP39905 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
GDNFP39905 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
GDNFP39905 ZNF355P-201ENST00000427301 3216 ntBASIC1.57□□□□□ -2.16
GDNFP39905 SNORD115-31-201ENST00000365318 82 ntBASIC1.56□□□□□ -2.16
GDNFP39905 MIR451A-201ENST00000385059 72 ntBASIC1.56□□□□□ -2.16
GDNFP39905 RNU6-935P-201ENST00000410371 100 ntBASIC1.56□□□□□ -2.16
GDNFP39905 RNU7-102P-201ENST00000458948 62 ntBASIC1.56□□□□□ -2.16
GDNFP39905 RNU6-1265P-201ENST00000516342 103 ntBASIC1.56□□□□□ -2.16
GDNFP39905 MIR7843-201ENST00000622274 79 ntBASIC1.56□□□□□ -2.16
GDNFP39905 AC027335.2-201ENST00000624030 375 ntBASIC1.56□□□□□ -2.16
GDNFP39905 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
GDNFP39905 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
GDNFP39905 MIR938-201ENST00000401216 83 ntBASIC1.55□□□□□ -2.16
GDNFP39905 AC008608.1-201ENST00000603910 127 ntBASIC1.55□□□□□ -2.16
GDNFP39905 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.55□□□□□ -2.16
GDNFP39905 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
GDNFP39905 AL591704.2-201ENST00000421658 181 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms