Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-170P-201ENST00000362832 104 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 RNU6-47P-201ENST00000383866 107 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 MIR519E-201ENST00000385075 84 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 SNORD77B-201ENST00000391112 67 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 AC138907.4-201ENST00000570107 226 ntBASIC-0.7□□□□□ -2.52
COL18A1P39060 MIR20A-201ENST00000362279 71 ntBASIC-0.71□□□□□ -2.52
COL18A1P39060 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.71□□□□□ -2.52
COL18A1P39060 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.71□□□□□ -2.52
COL18A1P39060 RNY4-201ENST00000516507 96 ntBASIC-0.71□□□□□ -2.52
COL18A1P39060 MIR4460-201ENST00000577862 86 ntBASIC-0.71□□□□□ -2.52
COL18A1P39060 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 SNORD115-35-201ENST00000365122 82 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 RNU6-571P-201ENST00000384128 107 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 RNU6-474P-201ENST00000384243 107 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
COL18A1P39060 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.72□□□□□ -2.52
COL18A1P39060 RNU7-164P-201ENST00000459221 62 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 RNU7-106P-201ENST00000459514 67 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 RNU7-2P-201ENST00000516096 62 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 RNA5SP470-201ENST00000516463 106 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 AC021443.1-201ENST00000604478 211 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 AC093726.3-201ENST00000637588 150 ntBASIC-0.72□□□□□ -2.52
COL18A1P39060 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNU6-455P-201ENST00000384681 107 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 MIR204-201ENST00000385200 110 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 AC022028.1-201ENST00000412054 408 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNA5SP236-201ENST00000516169 116 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNU6-175P-201ENST00000516896 107 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNU6-643P-201ENST00000384018 107 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 MIR1270-201ENST00000459320 83 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 RNU2-4P-201ENST00000606190 192 ntBASIC-0.73□□□□□ -2.53
COL18A1P39060 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 SNORA3B-201ENST00000391305 131 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 MTATP6P21-201ENST00000440681 189 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 MIR4306-201ENST00000583390 91 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 U2.14-201ENST00000615943 113 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.74□□□□□ -2.53
COL18A1P39060 AC134503.1-201ENST00000633048 54 ntBASIC-0.74□□□□□ -2.53
COL18A1P39060 RNU6-154P-201ENST00000384306 106 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU6-240P-201ENST00000516098 97 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 U6.104-201ENST00000637979 90 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU6-706P-201ENST00000517229 104 ntBASIC-0.75□□□□□ -2.53
COL18A1P39060 RNU6-900P-201ENST00000384498 102 ntBASIC-0.76□□□□□ -2.53
COL18A1P39060 RNU6-880P-201ENST00000384526 107 ntBASIC-0.76□□□□□ -2.53
COL18A1P39060 MT-TY-201ENST00000387409 66 ntBASIC-0.76□□□□□ -2.53
COL18A1P39060 AC107027.2-201ENST00000512197 115 ntBASIC-0.76□□□□□ -2.53
COL18A1P39060 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 RNU6-901P-201ENST00000384593 106 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 MIR496-201ENST00000385226 102 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 RNU7-123P-201ENST00000515911 60 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 MIR548AG2-201ENST00000581228 64 ntBASIC-0.77□□□□□ -2.53
COL18A1P39060 RNU6-818P-201ENST00000364837 108 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 SNORD18B-201ENST00000365659 72 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-472P-201ENST00000384299 107 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNY3P14-201ENST00000384309 102 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR516A2-201ENST00000384888 90 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR516A1-201ENST00000385033 90 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR1302-6-201ENST00000408466 90 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 AC244090.1-201ENST00000441884 93 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR2113-201ENST00000459007 91 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 AC021146.6-201ENST00000514659 117 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-850P-201ENST00000516934 103 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR539-201ENST00000365690 78 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-713P-201ENST00000384761 107 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-985P-201ENST00000410182 104 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 MIR376B-201ENST00000614515 100 ntBASIC-0.78□□□□□ -2.53
COL18A1P39060 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 RNY4P28-201ENST00000365281 93 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 SNORD38.2-201ENST00000384470 69 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 SNORD2-201ENST00000459163 69 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 RNY3P16-201ENST00000516338 101 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 MIR4680-201ENST00000580906 66 ntBASIC-0.79□□□□□ -2.54
COL18A1P39060 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 MIR9-2-201ENST00000384838 87 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 MIR216B-201ENST00000390186 82 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.8□□□□□ -2.54
COL18A1P39060 MTND1P19-201ENST00000511780 315 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms