Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ACTN4O43707 RNU6-535P-201ENST00000384722 107 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 AP000553.5-201ENST00000641933 54 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ACTN4O43707 SNORD113.3-201ENST00000364630 78 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNU6-382P-201ENST00000365181 106 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 Y_RNA.330-201ENST00000365230 109 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNU6-141P-201ENST00000410499 105 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 AC244098.3-201ENST00000424803 96 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 AC069503.3-201ENST00000618674 145 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ACTN4O43707 RNA5SP245-201ENST00000364239 121 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNA5SP160-201ENST00000364866 120 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU6-287P-201ENST00000516230 98 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 AL645939.4-201ENST00000604495 135 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ACTN4O43707 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AC110620.1-201ENST00000416042 228 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AC019176.1-201ENST00000518519 225 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AL078603.1-201ENST00000603824 313 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTN4O43707 AL691482.2-201ENST00000457453 84 ntBASIC2.35□□□□□ -2.03
ACTN4O43707 MIR4713-201ENST00000582691 75 ntBASIC2.35□□□□□ -2.03
ACTN4O43707 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTN4O43707 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.34□□□□□ -2.03
ACTN4O43707 Y_RNA.258-201ENST00000364613 105 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 RNU6-364P-201ENST00000384387 107 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 SNORA40.6-201ENST00000391153 128 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 AC008608.1-201ENST00000603910 127 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 SNORD115-44-201ENST00000365391 82 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 RNU6-614P-201ENST00000384369 107 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 MIR633-201ENST00000384821 98 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 snoU13.9-201ENST00000458927 103 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AC079140.2-201ENST00000506193 142 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AC036111.3-201ENST00000526389 112 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 U6.59-201ENST00000615686 107 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AL109933.3-201ENST00000619095 188 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 RNU6-669P-201ENST00000365575 107 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 RNU6-1065P-201ENST00000384513 106 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 SNORD1A-201ENST00000364968 72 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 RPS26P5-201ENST00000418544 335 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AC244505.6-201ENST00000452829 130 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 MIR3937-201ENST00000580135 106 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 MIR4676-201ENST00000583078 72 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AC104984.5-201ENST00000586878 94 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTN4O43707 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ACTN4O43707 RNU6-1187P-201ENST00000364771 110 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU6-982P-201ENST00000516216 102 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 MIR302D-201ENST00000362275 68 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 MIR938-201ENST00000401216 83 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 RNU7-13P-201ENST00000516413 62 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 RNU6-165P-201ENST00000517170 99 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORD111-201ENST00000408139 94 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 AC079150.2-201ENST00000443733 78 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 MTND4LP1-201ENST00000446263 157 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 RNU7-40P-201ENST00000516397 64 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 AC027335.2-201ENST00000624030 375 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 RNU6-668P-201ENST00000364180 107 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 SNORD75.2-201ENST00000408784 58 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 MIR4448-201ENST00000584360 86 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 AC103810.8-201ENST00000607347 118 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 MIR6873-201ENST00000622788 63 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 RNU7-102P-201ENST00000458948 62 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 Y_RNA.783-201ENST00000613546 102 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 AC106800.4-201ENST00000614905 153 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ACTN4O43707 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA75.2-201ENST00000391138 150 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA75.3-201ENST00000391231 150 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms