Protein–RNA interactions for Protein: Q9NQH7

XPNPEP3, Probable Xaa-Pro aminopeptidase 3, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3Q9NQH7 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
XPNPEP3Q9NQH7 AC096949.1-201ENST00000412047 152 ntBASIC0.97□□□□□ -2.25
XPNPEP3Q9NQH7 AC138749.4-201ENST00000563970 127 ntBASIC0.97□□□□□ -2.25
XPNPEP3Q9NQH7 MIR4679-2-201ENST00000578358 77 ntBASIC0.97□□□□□ -2.25
XPNPEP3Q9NQH7 RNU6-363P-201ENST00000362895 105 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 RNU4-58P-201ENST00000363192 141 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 RNY1P2-201ENST00000364820 117 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-1144P-201ENST00000384247 104 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 AC004941.2-201ENST00000427009 228 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 RPL39P34-201ENST00000477141 156 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-531P-201ENST00000516694 104 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 MIR4500-201ENST00000579472 76 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 AC008608.1-201ENST00000603910 127 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 AL162726.3-218ENST00000636401 95 ntBASIC0.96□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.95□□□□□ -2.26
XPNPEP3Q9NQH7 MIR1912-201ENST00000410389 80 ntBASIC0.95□□□□□ -2.26
XPNPEP3Q9NQH7 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
XPNPEP3Q9NQH7 MIR8066-201ENST00000617280 78 ntBASIC0.95□□□□□ -2.26
XPNPEP3Q9NQH7 MIR101-2-201ENST00000362195 79 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-880P-201ENST00000384526 107 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 MIR548I2-201ENST00000408348 149 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-733P-201ENST00000410759 104 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-412P-201ENST00000516434 106 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 AC011195.1-201ENST00000578177 177 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 AL035470.1-201ENST00000622571 220 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 AP001362.1-201ENST00000625165 124 ntBASIC0.94□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-834P-201ENST00000362367 110 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 AC068339.1-201ENST00000526965 141 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 MIR376B-201ENST00000614515 100 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 MIR6129-201ENST00000616087 109 ntBASIC0.93□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 MIR605-201ENST00000385078 83 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-448P-201ENST00000517052 107 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 AC138907.6-201ENST00000568401 126 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 AC090897.1-201ENST00000580909 226 ntBASIC0.92□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-1290P-201ENST00000362957 109 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.291-201ENST00000364886 113 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 RNA5SP117-201ENST00000365294 118 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6-429P-201ENST00000384582 108 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 MIR34C-201ENST00000384831 77 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 MIR6513-201ENST00000621188 64 ntBASIC0.91□□□□□ -2.26
XPNPEP3Q9NQH7 Y_RNA.273-201ENST00000364703 102 ntBASIC0.9□□□□□ -2.27
XPNPEP3Q9NQH7 SNORD38.2-201ENST00000384470 69 ntBASIC0.9□□□□□ -2.27
XPNPEP3Q9NQH7 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-679P-201ENST00000391003 106 ntBASIC0.9□□□□□ -2.27
XPNPEP3Q9NQH7 MTND5P40-201ENST00000559945 246 ntBASIC0.9□□□□□ -2.27
XPNPEP3Q9NQH7 U8.6-201ENST00000364939 135 ntBASIC0.89□□□□□ -2.27
XPNPEP3Q9NQH7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.89□□□□□ -2.27
XPNPEP3Q9NQH7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 Y_RNA.281-201ENST00000364774 94 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-535P-201ENST00000384722 107 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 MIR193B-201ENST00000384907 83 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 MIR573-201ENST00000384964 99 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 Y_RNA.629-201ENST00000411368 105 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 MIR5009-201ENST00000578736 100 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 MIR3612-201ENST00000579753 87 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.88□□□□□ -2.27
XPNPEP3Q9NQH7 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1107P-201ENST00000364817 104 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 AC244098.3-201ENST00000424803 96 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 BX276092.1-201ENST00000427368 251 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 AP003327.1-201ENST00000529684 127 ntBASIC0.87□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.86□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
XPNPEP3Q9NQH7 SPINT5P-201ENST00000448174 155 ntBASIC0.86□□□□□ -2.27
XPNPEP3Q9NQH7 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1325P-201ENST00000364905 105 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 Y_RNA.374-201ENST00000365606 101 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-1014P-201ENST00000383940 103 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 MIR936-201ENST00000401264 98 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 AL590095.2-201ENST00000604136 117 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 AC096720.1-201ENST00000604441 183 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 AL442128.1-201ENST00000615151 90 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
XPNPEP3Q9NQH7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.84□□□□□ -2.27
XPNPEP3Q9NQH7 SNORD100-201ENST00000408573 76 ntBASIC0.84□□□□□ -2.27
XPNPEP3Q9NQH7 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
XPNPEP3Q9NQH7 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms