Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
IFT43Q96FT9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
IFT43Q96FT9 RNU6-1094P-201ENST00000362416 104 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 MIR764-201ENST00000390811 85 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 RNU1-78P-201ENST00000391248 165 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 RNU6-557P-201ENST00000516842 110 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.04□□□□□ -2.08
IFT43Q96FT9 U7.4-201ENST00000614961 63 ntBASIC2.04□□□□□ -2.08
IFT43Q96FT9 RNU6-403P-201ENST00000363163 104 ntBASIC2.03□□□□□ -2.08
IFT43Q96FT9 RNU6-466P-201ENST00000391224 103 ntBASIC2.03□□□□□ -2.08
IFT43Q96FT9 RNU6-380P-201ENST00000410207 107 ntBASIC2.03□□□□□ -2.08
IFT43Q96FT9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
IFT43Q96FT9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
IFT43Q96FT9 RNU6-478P-201ENST00000363904 110 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 Y_RNA.283-201ENST00000364798 112 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 MIR889-201ENST00000401280 79 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 SNORD63B-201ENST00000411005 70 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 AL450471.1-201ENST00000447509 127 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 RNU7-106P-201ENST00000459514 67 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 RNU7-10P-201ENST00000607194 63 ntBASIC2.02□□□□□ -2.09
IFT43Q96FT9 MIR101-2-201ENST00000362195 79 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 MIR635-201ENST00000384830 98 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 AC048334.1-201ENST00000477975 159 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 SNORD92-201ENST00000585078 85 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
IFT43Q96FT9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
IFT43Q96FT9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2□□□□□ -2.09
IFT43Q96FT9 SNORA63.2-201ENST00000362603 126 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 SNORD113.3-201ENST00000364630 78 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 Y_RNA.330-201ENST00000365230 109 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 MIR548U-201ENST00000390728 81 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 RNU7-185P-201ENST00000459215 60 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 Y_RNA.660-201ENST00000516002 120 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 MIR548H5-201ENST00000580314 60 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 5S_rRNA.15-201ENST00000611169 127 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 AC023934.1-201ENST00000574529 2389 ntBASIC2□□□□□ -2.09
IFT43Q96FT9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IFT43Q96FT9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IFT43Q96FT9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 RNU6-686P-201ENST00000364839 107 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 SNORA25.9-201ENST00000365087 128 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 SNORD100-201ENST00000408573 76 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 RNU6-75P-201ENST00000515944 104 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 SNORA18.5-201ENST00000516616 101 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 RN7SKP88-201ENST00000516847 250 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 MIR5089-201ENST00000580047 84 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 MIR4422-201ENST00000581938 83 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 7SK.8-201ENST00000612110 250 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 7SK.11-201ENST00000615477 250 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 7SK.13-201ENST00000622040 250 ntBASIC1.99□□□□□ -2.09
IFT43Q96FT9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.98□□□□□ -2.09
IFT43Q96FT9 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 RNA5SP292-201ENST00000390974 118 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 MIR1257-201ENST00000408490 117 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 RPS27P16-201ENST00000425758 201 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 snoU13.21-201ENST00000459368 105 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 FGF7P7-201ENST00000514120 227 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 MIR3064-201ENST00000581130 66 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 AC104996.3-201ENST00000590718 94 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 AL353997.5-201ENST00000618886 171 ntBASIC1.98□□□□□ -2.09
IFT43Q96FT9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
IFT43Q96FT9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.97□□□□□ -2.09
IFT43Q96FT9 MIR519A1-201ENST00000385257 85 ntBASIC1.97□□□□□ -2.09
IFT43Q96FT9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.97□□□□□ -2.09
IFT43Q96FT9 AC036111.3-201ENST00000526389 112 ntBASIC1.97□□□□□ -2.09
IFT43Q96FT9 AC013244.2-201ENST00000603396 103 ntBASIC1.97□□□□□ -2.09
IFT43Q96FT9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.96□□□□□ -2.1
IFT43Q96FT9 MIRLET7A1-201ENST00000362295 80 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 RNU6-934P-201ENST00000365154 107 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 SNORD83.1-201ENST00000411362 77 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 SNORA31.2-201ENST00000516019 134 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 MIR6082-201ENST00000613604 109 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.96□□□□□ -2.1
IFT43Q96FT9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
IFT43Q96FT9 RNU6-957P-201ENST00000363652 99 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 RNU6-132P-201ENST00000383863 107 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 Y_RNA.545-201ENST00000384652 105 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 Y_RNA.565-201ENST00000384719 101 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 SNORA75.2-201ENST00000391138 150 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 SNORA75.3-201ENST00000391231 150 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 AC139453.2-201ENST00000487255 133 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 TRAJ51-201ENST00000504127 63 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
IFT43Q96FT9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
IFT43Q96FT9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.95□□□□□ -2.1
IFT43Q96FT9 RNU6-161P-201ENST00000363051 106 ntBASIC1.94□□□□□ -2.1
IFT43Q96FT9 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
IFT43Q96FT9 RNU6-765P-201ENST00000516916 99 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms