Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RNU4-69P-201ENST00000410677 143 ntBASIC-1.02□□□□□ -2.57
SSX9Q7RTT3 MIR548AG2-201ENST00000581228 64 ntBASIC-1.02□□□□□ -2.57
SSX9Q7RTT3 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.03□□□□□ -2.57
SSX9Q7RTT3 snoU13.11-201ENST00000459219 104 ntBASIC-1.03□□□□□ -2.57
SSX9Q7RTT3 RNU6-154P-201ENST00000384306 106 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 MIR617-201ENST00000385030 97 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 AC093423.1-201ENST00000440817 142 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 HAR1A.1-201ENST00000459583 118 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 RNA5SP236-201ENST00000516169 116 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 RNU6-175P-201ENST00000516896 107 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 MIR4460-201ENST00000577862 86 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 MIR548AE1-201ENST00000583292 70 ntBASIC-1.04□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 MIR539-201ENST00000365690 78 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU6-47P-201ENST00000383866 107 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU6-643P-201ENST00000384018 107 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 MTND5P20-201ENST00000448677 143 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU7-164P-201ENST00000459221 62 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU7-106P-201ENST00000459514 67 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU6-240P-201ENST00000516098 97 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 AC009779.6-201ENST00000603972 165 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 AC021443.1-201ENST00000604478 211 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 AC093726.3-201ENST00000637588 150 ntBASIC-1.05□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 RNU6-474P-201ENST00000384243 107 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 RNU2-4P-201ENST00000606190 192 ntBASIC-1.06□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 RNU7-2P-201ENST00000516096 62 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 AC138907.4-201ENST00000570107 226 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 AC011603.4-201ENST00000611325 277 ntBASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.07□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 SNORD115-44-201ENST00000365391 82 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 RNU6-571P-201ENST00000384128 107 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 SNORD77B-201ENST00000391112 67 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 RNU7-123P-201ENST00000515911 60 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.08□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.09□□□□□ -2.58
SSX9Q7RTT3 AL445193.1-201ENST00000441183 141 ntBASIC-1.09□□□□□ -2.58
SSX9Q7RTT3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.09□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.09□□□□□ -2.58
SSX9Q7RTT3 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 MIR2113-201ENST00000459007 91 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 RNY3P16-201ENST00000516338 101 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 MIR376B-201ENST00000614515 100 ntBASIC-1.1□□□□□ -2.59
SSX9Q7RTT3 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.11□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.11□□□□□ -2.59
SSX9Q7RTT3 SNORA51.5-201ENST00000384126 131 ntBASIC-1.11□□□□□ -2.59
SSX9Q7RTT3 MT-TD-201ENST00000387419 68 ntBASIC-1.11□□□□□ -2.59
SSX9Q7RTT3 RNA5SP169-201ENST00000517268 117 ntBASIC-1.11□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 RNU6-901P-201ENST00000384593 106 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 MIR9-2-201ENST00000384838 87 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 MIR204-201ENST00000385200 110 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 MIR196A1-201ENST00000388006 70 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 RNU6-850P-201ENST00000516934 103 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 AP000676.1-201ENST00000533307 52 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 MIR4680-201ENST00000580906 66 ntBASIC-1.12□□□□□ -2.59
SSX9Q7RTT3 RNU6-472P-201ENST00000384299 107 ntBASIC-1.13□□□□□ -2.59
SSX9Q7RTT3 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
SSX9Q7RTT3 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
SSX9Q7RTT3 MIR335-201ENST00000362173 94 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 MT-TY-201ENST00000387409 66 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 RNU6-287P-201ENST00000516230 98 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.14□□□□□ -2.59
SSX9Q7RTT3 MTND4P29-201ENST00000503122 1372 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 MIR20A-201ENST00000362279 71 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 SNORD115-35-201ENST00000365122 82 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 RNU6-616P-201ENST00000384353 107 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 RNU6-493P-201ENST00000391321 108 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 MIR4643-201ENST00000577473 78 ntBASIC-1.15□□□□□ -2.59
SSX9Q7RTT3 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.16□□□□□ -2.6
SSX9Q7RTT3 RNU6-713P-201ENST00000384761 107 ntBASIC-1.16□□□□□ -2.6
SSX9Q7RTT3 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.16□□□□□ -2.6
SSX9Q7RTT3 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.17□□□□□ -2.6
SSX9Q7RTT3 SNORD83B-201ENST00000386745 93 ntBASIC-1.17□□□□□ -2.6
SSX9Q7RTT3 MTATP6P21-201ENST00000440681 189 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms