Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC096644.2-201ENST00000429278 159 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 SNORD42B-201ENST00000458893 67 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 MIR4723-201ENST00000585070 81 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 MTND5P26-201ENST00000426018 1752 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNU6-957P-201ENST00000363652 99 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.299-201ENST00000364973 94 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.389-201ENST00000383924 113 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 SNORD101-201ENST00000384027 73 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 SNORA26.4-201ENST00000391188 123 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNU6-1213P-201ENST00000517075 94 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 MIR4696-201ENST00000581431 70 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 MIR6888-201ENST00000621977 67 ntBASIC-2.48□□□□□ -2.81
HIST1H1AQ02539 RNA5SP26-201ENST00000362406 119 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 RNU6-728P-201ENST00000365375 104 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 VN1R91P-201ENST00000594377 169 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 MIR1321-201ENST00000637766 79 ntBASIC-2.49□□□□□ -2.81
HIST1H1AQ02539 RNU6-164P-201ENST00000364604 103 ntBASIC-2.5□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.5□□□□□ -2.81
HIST1H1AQ02539 SNORD77B-201ENST00000391112 67 ntBASIC-2.5□□□□□ -2.81
HIST1H1AQ02539 AL731563.1-201ENST00000442202 214 ntBASIC-2.5□□□□□ -2.81
HIST1H1AQ02539 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.5□□□□□ -2.81
HIST1H1AQ02539 RNU6-664P-201ENST00000362381 107 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.526-201ENST00000384572 110 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 MIR1207-201ENST00000408249 87 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 AC107399.1-201ENST00000451226 265 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 AC022079.1-201ENST00000621546 602 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.51□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.52□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.52□□□□□ -2.81
HIST1H1AQ02539 RNU6-935P-201ENST00000410371 100 ntBASIC-2.52□□□□□ -2.81
HIST1H1AQ02539 RNU6-559P-201ENST00000516151 98 ntBASIC-2.52□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.53□□□□□ -2.81
HIST1H1AQ02539 RNU6-704P-201ENST00000364162 103 ntBASIC-2.53□□□□□ -2.81
HIST1H1AQ02539 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.53□□□□□ -2.81
HIST1H1AQ02539 MIR624-201ENST00000385217 97 ntBASIC-2.53□□□□□ -2.81
HIST1H1AQ02539 AL078595.1-201ENST00000404458 226 ntBASIC-2.53□□□□□ -2.81
HIST1H1AQ02539 RNU6-924P-201ENST00000362926 108 ntBASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 MIR34C-201ENST00000384831 77 ntBASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.54□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 RNU6-690P-201ENST00000365242 106 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 SNORA79-201ENST00000408376 140 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 MTATP6P19-201ENST00000413797 659 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.653-201ENST00000459091 95 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 AC048344.4-201ENST00000619744 527 ntBASIC-2.55□□□□□ -2.82
HIST1H1AQ02539 RNU6-235P-201ENST00000362644 107 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 RNU6-647P-201ENST00000364243 107 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 MIR548H3-201ENST00000408771 118 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 RNU6-370P-201ENST00000411008 104 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 AC015540.1-201ENST00000615828 501 ntBASIC-2.56□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 SNORD38.2-201ENST00000384470 69 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 U3.27-201ENST00000391237 200 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 snoU18.1-201ENST00000629629 71 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 U6.96-201ENST00000636425 70 ntBASIC-2.57□□□□□ -2.82
HIST1H1AQ02539 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 RNU6-259P-201ENST00000383999 107 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 RNU6-616P-201ENST00000384353 107 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 MIR451A-201ENST00000385059 72 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 RNU6-453P-201ENST00000516819 85 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 AC073869.6-201ENST00000640656 341 ntBASIC-2.58□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.157-201ENST00000363638 102 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 RNU6-662P-201ENST00000384253 104 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 RNU6-880P-201ENST00000384526 107 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 AC138393.2-201ENST00000414742 246 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 AC099799.1-201ENST00000439809 192 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 U8.20-201ENST00000459445 131 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 AC084782.3-201ENST00000612282 578 ntBASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.59□□□□□ -2.82
HIST1H1AQ02539 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 RNU6-102P-201ENST00000384485 104 ntBASIC-2.6□□□□□ -2.83
HIST1H1AQ02539 MIR487B-201ENST00000385021 84 ntBASIC-2.6□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms