Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AC141846.1-201ENST00000568348 142 ntBASIC1.18□□□□□ -2.22
TTC3P53804 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
TTC3P53804 U7.3-201ENST00000616123 62 ntBASIC1.18□□□□□ -2.22
TTC3P53804 Y_RNA.95-201ENST00000363079 95 ntBASIC1.17□□□□□ -2.22
TTC3P53804 RNU4-58P-201ENST00000363192 141 ntBASIC1.17□□□□□ -2.22
TTC3P53804 RNA5SP173-201ENST00000364857 136 ntBASIC1.17□□□□□ -2.22
TTC3P53804 RNU4-83P-201ENST00000410863 133 ntBASIC1.17□□□□□ -2.22
TTC3P53804 RNU6-1194P-201ENST00000516208 104 ntBASIC1.17□□□□□ -2.22
TTC3P53804 MALAT1.1-201ENST00000618249 95 ntBASIC1.17□□□□□ -2.22
TTC3P53804 Y_RNA.388-201ENST00000383919 113 ntBASIC1.16□□□□□ -2.22
TTC3P53804 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TTC3P53804 RNU1-98P-201ENST00000458992 160 ntBASIC1.16□□□□□ -2.22
TTC3P53804 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
TTC3P53804 AC006254.2-201ENST00000603259 279 ntBASIC1.16□□□□□ -2.22
TTC3P53804 MIR6516-201ENST00000630554 81 ntBASIC1.16□□□□□ -2.22
TTC3P53804 U6.109-201ENST00000636749 87 ntBASIC1.16□□□□□ -2.22
TTC3P53804 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
TTC3P53804 SNORA26.2-201ENST00000390922 122 ntBASIC1.16□□□□□ -2.22
TTC3P53804 RNA5SP95-201ENST00000410319 137 ntBASIC1.16□□□□□ -2.22
TTC3P53804 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.16□□□□□ -2.22
TTC3P53804 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.16□□□□□ -2.22
TTC3P53804 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.16□□□□□ -2.22
TTC3P53804 AC012531.4-201ENST00000616509 177 ntBASIC1.16□□□□□ -2.22
TTC3P53804 AC012676.2-201ENST00000619258 186 ntBASIC1.16□□□□□ -2.22
TTC3P53804 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TTC3P53804 RNY1P2-201ENST00000364820 117 ntBASIC1.15□□□□□ -2.22
TTC3P53804 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.22
TTC3P53804 SNORA7.5-201ENST00000410672 110 ntBASIC1.15□□□□□ -2.22
TTC3P53804 RNU7-185P-201ENST00000459215 60 ntBASIC1.15□□□□□ -2.22
TTC3P53804 AC026421.1-201ENST00000519101 163 ntBASIC1.15□□□□□ -2.22
TTC3P53804 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.23
TTC3P53804 Y_RNA.342-201ENST00000365352 113 ntBASIC1.15□□□□□ -2.23
TTC3P53804 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
TTC3P53804 AC004941.2-201ENST00000427009 228 ntBASIC1.15□□□□□ -2.23
TTC3P53804 AL513043.2-201ENST00000573941 143 ntBASIC1.15□□□□□ -2.23
TTC3P53804 MIR103A2-201ENST00000362154 78 ntBASIC1.14□□□□□ -2.23
TTC3P53804 MIR488-201ENST00000365739 83 ntBASIC1.14□□□□□ -2.23
TTC3P53804 RNU6-644P-201ENST00000391155 98 ntBASIC1.14□□□□□ -2.23
TTC3P53804 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
TTC3P53804 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
TTC3P53804 RNU7-90P-201ENST00000459216 62 ntBASIC1.14□□□□□ -2.23
TTC3P53804 MIR5000-201ENST00000577717 103 ntBASIC1.14□□□□□ -2.23
TTC3P53804 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TTC3P53804 MIR30D-201ENST00000362283 70 ntBASIC1.13□□□□□ -2.23
TTC3P53804 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-820P-201ENST00000384273 107 ntBASIC1.13□□□□□ -2.23
TTC3P53804 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
TTC3P53804 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
TTC3P53804 SNORD93-201ENST00000408813 74 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
TTC3P53804 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
TTC3P53804 MIR4285-201ENST00000581001 85 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-86P-201ENST00000606534 107 ntBASIC1.13□□□□□ -2.23
TTC3P53804 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-979P-201ENST00000383896 107 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-1307P-201ENST00000391012 103 ntBASIC1.13□□□□□ -2.23
TTC3P53804 Y_RNA.607-201ENST00000410597 98 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNU6-592P-201ENST00000411333 103 ntBASIC1.13□□□□□ -2.23
TTC3P53804 MIR2115-201ENST00000516657 100 ntBASIC1.13□□□□□ -2.23
TTC3P53804 RNY1P1-201ENST00000364372 112 ntBASIC1.12□□□□□ -2.23
TTC3P53804 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
TTC3P53804 AC109327.2-201ENST00000448339 378 ntBASIC1.12□□□□□ -2.23
TTC3P53804 CYP3A137P-201ENST00000562436 69 ntBASIC1.12□□□□□ -2.23
TTC3P53804 AP001362.1-201ENST00000625165 124 ntBASIC1.12□□□□□ -2.23
TTC3P53804 AC006160.2-201ENST00000637708 154 ntBASIC1.12□□□□□ -2.23
TTC3P53804 RNU6-170P-201ENST00000362832 104 ntBASIC1.11□□□□□ -2.23
TTC3P53804 RNU6-1152P-201ENST00000384576 107 ntBASIC1.11□□□□□ -2.23
TTC3P53804 MIR125B2-201ENST00000385128 89 ntBASIC1.11□□□□□ -2.23
TTC3P53804 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
TTC3P53804 PVT1_3.1-201ENST00000620853 95 ntBASIC1.11□□□□□ -2.23
TTC3P53804 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
TTC3P53804 SNORD36A-201ENST00000362874 73 ntBASIC1.11□□□□□ -2.23
TTC3P53804 MIR4804-201ENST00000581683 73 ntBASIC1.11□□□□□ -2.23
TTC3P53804 RNU6-675P-201ENST00000384236 104 ntBASIC1.1□□□□□ -2.23
TTC3P53804 MIR34C-201ENST00000384831 77 ntBASIC1.1□□□□□ -2.23
TTC3P53804 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.1□□□□□ -2.23
TTC3P53804 AL353813.1-201ENST00000440700 253 ntBASIC1.1□□□□□ -2.23
TTC3P53804 SNORD79.1-201ENST00000516069 84 ntBASIC1.1□□□□□ -2.23
TTC3P53804 SNORD73B-201ENST00000364394 72 ntBASIC1.1□□□□□ -2.23
TTC3P53804 MIR635-201ENST00000384830 98 ntBASIC1.1□□□□□ -2.23
TTC3P53804 MIR532-201ENST00000385025 91 ntBASIC1.1□□□□□ -2.23
TTC3P53804 MIR548G-201ENST00000408442 89 ntBASIC1.1□□□□□ -2.23
TTC3P53804 RNY4P29-201ENST00000410801 97 ntBASIC1.1□□□□□ -2.23
TTC3P53804 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TTC3P53804 MIR516A2-201ENST00000384888 90 ntBASIC1.09□□□□□ -2.24
TTC3P53804 MIR516A1-201ENST00000385033 90 ntBASIC1.09□□□□□ -2.24
TTC3P53804 AL161932.1-201ENST00000437408 146 ntBASIC1.09□□□□□ -2.24
TTC3P53804 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.24
TTC3P53804 RNU6-762P-201ENST00000517107 102 ntBASIC1.09□□□□□ -2.24
TTC3P53804 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.24
TTC3P53804 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.24
TTC3P53804 RNU6-934P-201ENST00000365154 107 ntBASIC1.08□□□□□ -2.24
TTC3P53804 RNU6-535P-201ENST00000384722 107 ntBASIC1.08□□□□□ -2.24
TTC3P53804 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.08□□□□□ -2.24
TTC3P53804 RNU6-162P-201ENST00000516228 103 ntBASIC1.08□□□□□ -2.24
TTC3P53804 RNU6-448P-201ENST00000517052 107 ntBASIC1.08□□□□□ -2.24
TTC3P53804 MIR4714-201ENST00000580728 77 ntBASIC1.08□□□□□ -2.24
TTC3P53804 RNU6-1125P-201ENST00000363601 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms