Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
SOX2P48431 RNA5SP220-201ENST00000516298 104 ntBASIC0.91□□□□□ -2.26
SOX2P48431 MIR4500-201ENST00000579472 76 ntBASIC0.91□□□□□ -2.26
SOX2P48431 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
SOX2P48431 AL442128.1-201ENST00000615151 90 ntBASIC0.91□□□□□ -2.26
SOX2P48431 RNY3P2-201ENST00000362918 102 ntBASIC0.9□□□□□ -2.27
SOX2P48431 Y_RNA.163-201ENST00000363702 113 ntBASIC0.9□□□□□ -2.27
SOX2P48431 Y_RNA.191-201ENST00000363972 113 ntBASIC0.9□□□□□ -2.27
SOX2P48431 Y_RNA.355-201ENST00000365462 98 ntBASIC0.9□□□□□ -2.27
SOX2P48431 Y_RNA.377-201ENST00000365644 108 ntBASIC0.9□□□□□ -2.27
SOX2P48431 MIR577-201ENST00000385196 96 ntBASIC0.9□□□□□ -2.27
SOX2P48431 AC090897.1-201ENST00000580909 226 ntBASIC0.9□□□□□ -2.27
SOX2P48431 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
SOX2P48431 AC008608.1-201ENST00000603910 127 ntBASIC0.9□□□□□ -2.27
SOX2P48431 AC096720.1-201ENST00000604441 183 ntBASIC0.9□□□□□ -2.27
SOX2P48431 MIR6504-201ENST00000613520 61 ntBASIC0.9□□□□□ -2.27
SOX2P48431 SNORD38.1-201ENST00000363863 68 ntBASIC0.89□□□□□ -2.27
SOX2P48431 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
SOX2P48431 Y_RNA.466-201ENST00000384294 113 ntBASIC0.89□□□□□ -2.27
SOX2P48431 AP003327.1-201ENST00000529684 127 ntBASIC0.89□□□□□ -2.27
SOX2P48431 AC141557.1-201ENST00000540982 400 ntBASIC0.89□□□□□ -2.27
SOX2P48431 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
SOX2P48431 MIR6734-201ENST00000621166 68 ntBASIC0.89□□□□□ -2.27
SOX2P48431 MIR101-2-201ENST00000362195 79 ntBASIC0.88□□□□□ -2.27
SOX2P48431 RNU6-832P-201ENST00000363319 107 ntBASIC0.88□□□□□ -2.27
SOX2P48431 RNU4-36P-201ENST00000364294 144 ntBASIC0.88□□□□□ -2.27
SOX2P48431 RNU6-106P-201ENST00000384405 107 ntBASIC0.88□□□□□ -2.27
SOX2P48431 Y_RNA.697-201ENST00000516776 113 ntBASIC0.88□□□□□ -2.27
SOX2P48431 RNU6-448P-201ENST00000517052 107 ntBASIC0.88□□□□□ -2.27
SOX2P48431 MTND5P40-201ENST00000559945 246 ntBASIC0.88□□□□□ -2.27
SOX2P48431 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
SOX2P48431 uc_338.28-201ENST00000612082 187 ntBASIC0.88□□□□□ -2.27
SOX2P48431 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.88□□□□□ -2.27
SOX2P48431 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SOX2P48431 HSBP1P2-201ENST00000299671 229 ntBASIC0.87□□□□□ -2.27
SOX2P48431 Y_RNA.10-201ENST00000362371 110 ntBASIC0.87□□□□□ -2.27
SOX2P48431 RNU6-1099P-201ENST00000363533 107 ntBASIC0.87□□□□□ -2.27
SOX2P48431 RNU6-44P-201ENST00000384045 107 ntBASIC0.87□□□□□ -2.27
SOX2P48431 RNU6-1113P-201ENST00000384348 107 ntBASIC0.87□□□□□ -2.27
SOX2P48431 RNU6-554P-201ENST00000410466 106 ntBASIC0.87□□□□□ -2.27
SOX2P48431 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
SOX2P48431 RNU6-1006P-201ENST00000516998 103 ntBASIC0.87□□□□□ -2.27
SOX2P48431 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
SOX2P48431 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
SOX2P48431 Y_RNA.78-201ENST00000362970 110 ntBASIC0.86□□□□□ -2.27
SOX2P48431 RNU6-755P-201ENST00000364400 103 ntBASIC0.86□□□□□ -2.27
SOX2P48431 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
SOX2P48431 SPINT5P-201ENST00000448174 155 ntBASIC0.86□□□□□ -2.27
SOX2P48431 RNU6-90P-201ENST00000606352 106 ntBASIC0.86□□□□□ -2.27
SOX2P48431 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SOX2P48431 SNORA63.4-201ENST00000362763 126 ntBASIC0.85□□□□□ -2.27
SOX2P48431 RNU4-38P-201ENST00000364472 129 ntBASIC0.85□□□□□ -2.27
SOX2P48431 Y_RNA.247-201ENST00000364500 92 ntBASIC0.85□□□□□ -2.27
SOX2P48431 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SOX2P48431 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
SOX2P48431 MIR573-201ENST00000384964 99 ntBASIC0.85□□□□□ -2.27
SOX2P48431 MIR548G-201ENST00000408442 89 ntBASIC0.85□□□□□ -2.27
SOX2P48431 SNORD99-201ENST00000408612 74 ntBASIC0.85□□□□□ -2.27
SOX2P48431 AL031737.1-201ENST00000450125 223 ntBASIC0.85□□□□□ -2.27
SOX2P48431 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
SOX2P48431 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
SOX2P48431 Y_RNA.659-201ENST00000515994 113 ntBASIC0.85□□□□□ -2.27
SOX2P48431 MIR4452-201ENST00000583004 71 ntBASIC0.85□□□□□ -2.27
SOX2P48431 RNU7-10P-201ENST00000607194 63 ntBASIC0.85□□□□□ -2.27
SOX2P48431 RNU6-756P-201ENST00000383997 107 ntBASIC0.84□□□□□ -2.27
SOX2P48431 SNORA51.5-201ENST00000384126 131 ntBASIC0.84□□□□□ -2.27
SOX2P48431 RNU6-571P-201ENST00000384128 107 ntBASIC0.84□□□□□ -2.27
SOX2P48431 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
SOX2P48431 MIR1276-201ENST00000408707 83 ntBASIC0.84□□□□□ -2.27
SOX2P48431 BX276092.1-201ENST00000427368 251 ntBASIC0.84□□□□□ -2.27
SOX2P48431 MIR548H5-201ENST00000580314 60 ntBASIC0.84□□□□□ -2.27
SOX2P48431 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SOX2P48431 Y_RNA.56-201ENST00000362798 112 ntBASIC0.83□□□□□ -2.28
SOX2P48431 SNORD45B-201ENST00000364617 72 ntBASIC0.83□□□□□ -2.28
SOX2P48431 RNA5SP117-201ENST00000365294 118 ntBASIC0.83□□□□□ -2.28
SOX2P48431 RNU6-291P-201ENST00000384720 107 ntBASIC0.83□□□□□ -2.28
SOX2P48431 SNORD100-201ENST00000408573 76 ntBASIC0.83□□□□□ -2.28
SOX2P48431 Y_RNA.601-201ENST00000410500 113 ntBASIC0.83□□□□□ -2.28
SOX2P48431 SNRPGP12-201ENST00000449481 213 ntBASIC0.83□□□□□ -2.28
SOX2P48431 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.83□□□□□ -2.28
SOX2P48431 AC002350.1-201ENST00000490759 375 ntBASIC0.83□□□□□ -2.28
SOX2P48431 RNU6-904P-201ENST00000516206 101 ntBASIC0.83□□□□□ -2.28
SOX2P48431 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
SOX2P48431 AL353765.1-201ENST00000605514 183 ntBASIC0.83□□□□□ -2.28
SOX2P48431 RNU6-766P-201ENST00000362478 107 ntBASIC0.82□□□□□ -2.28
SOX2P48431 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
SOX2P48431 SNORA19.1-201ENST00000410656 129 ntBASIC0.82□□□□□ -2.28
SOX2P48431 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.82□□□□□ -2.28
SOX2P48431 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
SOX2P48431 MIR635-201ENST00000384830 98 ntBASIC0.81□□□□□ -2.28
SOX2P48431 SCARNA23-201ENST00000516060 130 ntBASIC0.81□□□□□ -2.28
SOX2P48431 RNA5SP102-201ENST00000516865 106 ntBASIC0.81□□□□□ -2.28
SOX2P48431 RNU6-850P-201ENST00000516934 103 ntBASIC0.81□□□□□ -2.28
SOX2P48431 MIR3613-201ENST00000579844 87 ntBASIC0.81□□□□□ -2.28
SOX2P48431 MIR450A1-201ENST00000362262 91 ntBASIC0.8□□□□□ -2.28
SOX2P48431 RNU6-170P-201ENST00000362832 104 ntBASIC0.8□□□□□ -2.28
SOX2P48431 Y_RNA.81-201ENST00000362997 102 ntBASIC0.8□□□□□ -2.28
SOX2P48431 Y_RNA.173-201ENST00000363776 113 ntBASIC0.8□□□□□ -2.28
SOX2P48431 Y_RNA.567-201ENST00000384736 106 ntBASIC0.8□□□□□ -2.28
SOX2P48431 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms