Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU4-67P-201ENST00000364569 141 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 RNU6-865P-201ENST00000364772 107 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 SNORD116-21-201ENST00000384507 92 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 RNU6-476P-201ENST00000384726 107 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HOXC8P31273 MIR936-201ENST00000401264 98 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 RNU7-48P-201ENST00000458875 63 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
HOXC8P31273 RNU6-816P-201ENST00000390914 107 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 RNU6-1268P-201ENST00000391214 107 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 RNU6-1239P-201ENST00000391310 107 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 RNU6-1064P-201ENST00000410626 104 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 MIR6082-201ENST00000613604 109 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 MIR6129-201ENST00000616087 109 ntBASIC0.73□□□□□ -2.29
HOXC8P31273 Y_RNA.35-201ENST00000362601 101 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 Y_RNA.42-201ENST00000362660 108 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 Y_RNA.119-201ENST00000363301 96 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 Y_RNA.155-201ENST00000363632 101 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 Y_RNA.328-201ENST00000365208 113 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 RNU6-1144P-201ENST00000384247 104 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 Y_RNA.507-201ENST00000384500 99 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 RNU6-1081P-201ENST00000384537 107 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 MIR4679-2-201ENST00000578358 77 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 MIR376B-201ENST00000614515 100 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 AL162726.3-218ENST00000636401 95 ntBASIC0.72□□□□□ -2.29
HOXC8P31273 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 RNU6-363P-201ENST00000362895 105 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 Y_RNA.98-201ENST00000363109 102 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 RNY1P2-201ENST00000364820 117 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 RNU6-1056P-201ENST00000383996 107 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 RNU6-880P-201ENST00000384526 107 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 MIR34C-201ENST00000384831 77 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 MIR216A-201ENST00000385063 110 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 RPL39P34-201ENST00000477141 156 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 MIR4711-201ENST00000578274 70 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
HOXC8P31273 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.71□□□□□ -2.3
HOXC8P31273 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HOXC8P31273 Y_RNA.85-201ENST00000363014 111 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 RNU4-58P-201ENST00000363192 141 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HOXC8P31273 RNU6-409P-201ENST00000384114 104 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 RNU6-429P-201ENST00000384582 108 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 RNU6-679P-201ENST00000391003 106 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 MIR548I2-201ENST00000408348 149 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.7□□□□□ -2.3
HOXC8P31273 AL353813.1-201ENST00000440700 253 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 MIR4500-201ENST00000579472 76 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 AP001362.1-201ENST00000625165 124 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.7□□□□□ -2.3
HOXC8P31273 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
HOXC8P31273 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HOXC8P31273 RNU6-1290P-201ENST00000362957 109 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 Y_RNA.291-201ENST00000364886 113 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 Y_RNA.309-201ENST00000365046 111 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 MIR1912-201ENST00000410389 80 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 AC092628.1-201ENST00000436250 252 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.69□□□□□ -2.3
HOXC8P31273 Y_RNA.697-201ENST00000516776 113 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 RNU6-765P-201ENST00000516916 99 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 AC068339.1-201ENST00000526965 141 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 MIR548AI-201ENST00000579940 88 ntBASIC0.69□□□□□ -2.3
HOXC8P31273 U8.6-201ENST00000364939 135 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 Y_RNA.360-201ENST00000365512 102 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 RNU6-1194P-201ENST00000516208 104 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 RNU6-448P-201ENST00000517052 107 ntBASIC0.68□□□□□ -2.3
HOXC8P31273 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HOXC8P31273 MIR101-2-201ENST00000362195 79 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 RNU6-834P-201ENST00000362367 110 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 Y_RNA.273-201ENST00000364703 102 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 Y_RNA.281-201ENST00000364774 94 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
HOXC8P31273 RNU6-1313P-201ENST00000362622 102 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 Y_RNA.49-201ENST00000362714 112 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 Y_RNA.205-201ENST00000364128 113 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 Y_RNA.247-201ENST00000364500 92 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNU6-1107P-201ENST00000364817 104 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNY1P4-201ENST00000384595 115 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNU6-291P-201ENST00000384720 107 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNU6-535P-201ENST00000384722 107 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 Y_RNA.629-201ENST00000411368 105 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 BX276092.1-201ENST00000427368 251 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 RNU6-412P-201ENST00000516434 106 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 MIR5009-201ENST00000578736 100 ntBASIC0.66□□□□□ -2.3
HOXC8P31273 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms