Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 SNORA3B-201ENST00000391305 131 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 RNU6-651P-201ENST00000411040 105 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 MTND5P40-201ENST00000559945 246 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.59□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 RNY3P1-201ENST00000365085 102 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 SNORD42.2-201ENST00000365570 69 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 MIR548I2-201ENST00000408348 149 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 SNORA79-201ENST00000408376 140 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 SNORD116-25-201ENST00000516517 92 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 RNU6-175P-201ENST00000516896 107 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 RNU7-188P-201ENST00000517063 64 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 U4.1-201ENST00000620349 87 ntBASIC-0.6□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 MIR9-2-201ENST00000384838 87 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 RNU6-101P-201ENST00000410323 104 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 RNU7-74P-201ENST00000459104 62 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 RNA5SP236-201ENST00000516169 116 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 RNY3P15-201ENST00000516297 97 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 SNORA40.15-201ENST00000516884 107 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 MIR3681-201ENST00000580089 72 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 MIR548AG2-201ENST00000581228 64 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 MIR4282-201ENST00000583613 67 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 AC069503.3-201ENST00000618674 145 ntBASIC-0.61□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 SNORD56B-201ENST00000384713 71 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 MIR181B2-201ENST00000385004 89 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU7-13P-201ENST00000516413 62 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU2-35P-201ENST00000516446 142 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNU6-875P-201ENST00000516488 106 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 AL365265.1-201ENST00000621045 234 ntBASIC-0.62□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 MIR519E-201ENST00000385075 84 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 MTND5P22-201ENST00000458380 195 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 MIR4500-201ENST00000579472 76 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 MIR4280-201ENST00000582178 76 ntBASIC-0.63□□□□□ -2.51
USH1CQ9Y6N9 RNU6-103P-201ENST00000363686 107 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU4-17P-201ENST00000365598 141 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 MIR539-201ENST00000365690 78 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU6-30P-201ENST00000384561 107 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU7-195P-201ENST00000458793 62 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 AL442663.2-201ENST00000554385 511 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 MIR4473-201ENST00000583731 91 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 AC139792.2-201ENST00000624218 587 ntBASIC-0.64□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 MIR206-201ENST00000384872 86 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 AC074198.2-201ENST00000508153 258 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 MIR548AE1-201ENST00000583292 70 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 uc_338.10-201ENST00000621872 182 ntBASIC-0.65□□□□□ -2.51
USH1CQ9Y6N9 MIR369-201ENST00000362155 70 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 RNU6-524P-201ENST00000384270 107 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 MIR617-201ENST00000385030 97 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 AC096720.1-201ENST00000604441 183 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 RNU6-86P-201ENST00000606534 107 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 AC145423.2-201ENST00000610631 239 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 U2.14-201ENST00000615943 113 ntBASIC-0.66□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 SNORD114-29-201ENST00000364819 70 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 AC113195.1-201ENST00000579952 141 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 YWHAEP2-201ENST00000580066 112 ntBASIC-0.67□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.68□□□□□ -2.52
USH1CQ9Y6N9 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 320.9 ms