Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU7-85P-201ENST00000458851 63 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 RN7SKP88-201ENST00000516847 250 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR548H5-201ENST00000580314 60 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 7SK.8-201ENST00000612110 250 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 7SK.11-201ENST00000615477 250 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 7SK.13-201ENST00000622040 250 ntBASIC2.1□□□□□ -2.07
PCDHGA11Q9Y5H2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-934P-201ENST00000365154 107 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6-466P-201ENST00000391224 103 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 SNORA25.13-201ENST00000516395 103 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
PCDHGA11Q9Y5H2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-1296P-201ENST00000383879 107 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORA59A-201ENST00000459326 152 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU7-153P-201ENST00000516455 62 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGA11Q9Y5H2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.221-201ENST00000364248 96 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORD63B-201ENST00000411005 70 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 snoU13.11-201ENST00000459219 104 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 AC048334.1-201ENST00000477975 159 ntBASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PCDHGA11Q9Y5H2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-811P-201ENST00000384069 107 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORD111-201ENST00000408139 94 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORD100-201ENST00000408573 76 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 AC013244.2-201ENST00000603396 103 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR6082-201ENST00000613604 109 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
PCDHGA11Q9Y5H2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU4-82P-201ENST00000362443 140 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.56-201ENST00000362798 112 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-129P-201ENST00000391022 107 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORD83.1-201ENST00000411362 77 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU7-106P-201ENST00000459514 67 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 UBE2DNL-203ENST00000474922 222 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORA31.2-201ENST00000516019 134 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-765P-201ENST00000516916 99 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 AC036111.3-201ENST00000526389 112 ntBASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.94-201ENST00000363068 106 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.283-201ENST00000364798 112 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.536-201ENST00000384621 113 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR548U-201ENST00000390728 81 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 AL591704.2-201ENST00000421658 181 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR4712-201ENST00000583750 82 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 SNORD92-201ENST00000585078 85 ntBASIC2.04□□□□□ -2.08
PCDHGA11Q9Y5H2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.13-201ENST00000362403 112 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU6-315P-201ENST00000362666 107 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR125B2-201ENST00000385128 89 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 snoU13.21-201ENST00000459368 105 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 MIR4796-201ENST00000580742 81 ntBASIC2.03□□□□□ -2.08
PCDHGA11Q9Y5H2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-380P-201ENST00000410207 107 ntBASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 RPS27P16-201ENST00000425758 201 ntBASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-902P-201ENST00000517212 91 ntBASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR4771-2-201ENST00000577758 74 ntBASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR4771-1-201ENST00000582617 74 ntBASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHGA11Q9Y5H2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR449A-201ENST00000362113 91 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-776P-201ENST00000364403 104 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-1022P-201ENST00000365049 104 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR519A1-201ENST00000385257 85 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA75.2-201ENST00000391138 150 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA75.3-201ENST00000391231 150 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR934-201ENST00000401241 83 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 AC106800.4-201ENST00000614905 153 ntBASIC2.01□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU6-624P-201ENST00000363411 107 ntBASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 SNORA80D-201ENST00000384488 135 ntBASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 TRAJ51-201ENST00000504127 63 ntBASIC2□□□□□ -2.09
PCDHGA11Q9Y5H2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms