Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 Y_RNA.168-201ENST00000363740 102 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 RNY1P1-201ENST00000364372 112 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 RNU6-654P-201ENST00000364373 107 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 SNORD116-22-201ENST00000384430 92 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 RNU6-613P-201ENST00000410412 108 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
TMEM39AQ9NV64 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 Y_RNA.173-201ENST00000363776 113 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNU6-573P-201ENST00000383938 106 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNA5SP95-201ENST00000410319 137 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNU6-402P-201ENST00000410678 103 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNU6-165P-201ENST00000517170 99 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 AC138749.4-201ENST00000563970 127 ntBASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.96□□□□□ -2.1
TMEM39AQ9NV64 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 RNU6-592P-201ENST00000411333 103 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 AC090897.1-201ENST00000580909 226 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 AL161722.3-201ENST00000605789 2983 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 uc_338.6-201ENST00000613544 171 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 U6.109-201ENST00000636749 87 ntBASIC1.95□□□□□ -2.1
TMEM39AQ9NV64 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 HSBP1P2-201ENST00000299671 229 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 MIR377-201ENST00000362145 69 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 Y_RNA.224-201ENST00000364308 111 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 MT-TF-201ENST00000387314 71 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 AL512310.8-201ENST00000550183 120 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 MIR4500-201ENST00000579472 76 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
TMEM39AQ9NV64 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 RNA5SP133-201ENST00000363368 119 ntBASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 RNU6-1152P-201ENST00000384576 107 ntBASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 snoU13.18-201ENST00000459483 104 ntBASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 MIR4255-201ENST00000579351 72 ntBASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM39AQ9NV64 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 RNU6-1125P-201ENST00000363601 107 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 Y_RNA.327-201ENST00000365201 102 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 RNU6-480P-201ENST00000384332 107 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 SNORA2B-201ENST00000384583 137 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 MIR181B2-201ENST00000385004 89 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TMEM39AQ9NV64 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 Y_RNA.73-201ENST00000362910 113 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 Y_RNA.119-201ENST00000363301 96 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 RNY1P4-201ENST00000384595 115 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 AC022137.1-201ENST00000483735 151 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 RNU6-267P-201ENST00000516714 103 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 MIR4668-201ENST00000582284 70 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 MIR1245B-201ENST00000636115 69 ntBASIC1.91□□□□□ -2.1
TMEM39AQ9NV64 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 RNU6-580P-201ENST00000365159 107 ntBASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 RNU6-675P-201ENST00000384236 104 ntBASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 AC020891.4-201ENST00000605745 93 ntBASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.9□□□□□ -2.11
TMEM39AQ9NV64 RNU6-219P-201ENST00000364728 107 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 Y_RNA.609-201ENST00000410669 89 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 MIR18B-201ENST00000454574 71 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 AC048334.1-201ENST00000477975 159 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 AC008834.1-201ENST00000511612 175 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 AL513043.2-201ENST00000573941 143 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 AC025521.1-201ENST00000621624 286 ntBASIC1.89□□□□□ -2.11
TMEM39AQ9NV64 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 MIR1276-201ENST00000408707 83 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 SNORD93-201ENST00000408813 74 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 Y_RNA.620-201ENST00000411009 88 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 RNU6-1054P-201ENST00000411293 104 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 RPS27P16-201ENST00000425758 201 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 RN7SKP88-201ENST00000516847 250 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 MIR4422-201ENST00000581938 83 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 7SK.8-201ENST00000612110 250 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 7SK.11-201ENST00000615477 250 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 7SK.13-201ENST00000622040 250 ntBASIC1.88□□□□□ -2.11
TMEM39AQ9NV64 Y_RNA.330-201ENST00000365230 109 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 RNU6-497P-201ENST00000365316 104 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 BX276092.1-201ENST00000427368 251 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 SNRPGP12-201ENST00000449481 213 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 AC008163.1-202ENST00000636004 2889 ntBASIC1.87□□□□□ -2.11
TMEM39AQ9NV64 RNU6-392P-201ENST00000364926 101 ntBASIC1.86□□□□□ -2.11
TMEM39AQ9NV64 RNU6-242P-201ENST00000384359 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms