Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AP000553.5-201ENST00000641933 54 ntBASIC1.96□□□□□ -2.1
BHLHE41Q9C0J9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 AC008163.1-202ENST00000636004 2889 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 RNU4-58P-201ENST00000363192 141 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 SNORD115-27-201ENST00000364430 82 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-787P-201ENST00000384032 107 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 MIR514B-201ENST00000516774 80 ntBASIC1.95□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-403P-201ENST00000363163 104 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 Y_RNA.313-201ENST00000365095 103 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 Y_RNA.607-201ENST00000410597 98 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 AC023790.1-201ENST00000482174 347 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 AL512310.8-201ENST00000550183 120 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 MIR4491-201ENST00000581087 68 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 AL512598.1-201ENST00000610158 273 ntBASIC1.94□□□□□ -2.1
BHLHE41Q9C0J9 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-580P-201ENST00000365159 107 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-482P-201ENST00000391068 107 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-531P-201ENST00000516694 104 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-165P-201ENST00000517170 99 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BHLHE41Q9C0J9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 AC023934.1-201ENST00000574529 2389 ntBASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 RNU1-36P-201ENST00000365130 165 ntBASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-652P-201ENST00000365488 107 ntBASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 SNORA25.16-201ENST00000516741 121 ntBASIC1.92□□□□□ -2.1
BHLHE41Q9C0J9 RNU4-32P-201ENST00000363404 141 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 RNU6-524P-201ENST00000384270 107 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 MIR1257-201ENST00000408490 117 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 AC093729.1-201ENST00000513074 128 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 RN7SKP88-201ENST00000516847 250 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 7SK.8-201ENST00000612110 250 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 7SK.11-201ENST00000615477 250 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 7SK.13-201ENST00000622040 250 ntBASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
BHLHE41Q9C0J9 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-279P-201ENST00000391297 101 ntBASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 AC087499.7-201ENST00000441958 109 ntBASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 Y_RNA.648-201ENST00000459455 110 ntBASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
BHLHE41Q9C0J9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 MIR101-2-201ENST00000362195 79 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 MIR764-201ENST00000390811 85 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-243P-201ENST00000391140 107 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 MIR1236-201ENST00000408340 102 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 SNORD4B-201ENST00000459083 72 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 AC048334.1-201ENST00000477975 159 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
BHLHE41Q9C0J9 MIR516A2-201ENST00000384888 90 ntBASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 MIR516A1-201ENST00000385033 90 ntBASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 SNORD83.1-201ENST00000411362 77 ntBASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
BHLHE41Q9C0J9 Y_RNA.244-201ENST00000364484 109 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 SNORD113.3-201ENST00000364630 78 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 snoU13.21-201ENST00000459368 105 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-857P-201ENST00000515893 110 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 SNORA31.2-201ENST00000516019 134 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 RNA5SP395-201ENST00000516567 118 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
BHLHE41Q9C0J9 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 Y_RNA.316-201ENST00000365118 111 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 RPS27P16-201ENST00000425758 201 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-65P-201ENST00000516332 98 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-548P-201ENST00000517083 115 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
BHLHE41Q9C0J9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-934P-201ENST00000365154 107 ntBASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 RNU6-466P-201ENST00000391224 103 ntBASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
BHLHE41Q9C0J9 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms