Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 Y_RNA.330-201ENST00000365230 109 ntBASIC2.18□□□□□ -2.06
TRIM50Q86XT4 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
TRIM50Q86XT4 SNORA40.18-201ENST00000391200 128 ntBASIC2.18□□□□□ -2.06
TRIM50Q86XT4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM50Q86XT4 RNU6-509P-201ENST00000363519 107 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 SNORA72.6-201ENST00000384520 129 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 SNORA26.9-201ENST00000391322 122 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 Y_RNA.685-201ENST00000516532 108 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 MIR3198-2-201ENST00000577868 80 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 AL353997.5-201ENST00000618886 171 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 MIR3202-2-201ENST00000635980 79 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
TRIM50Q86XT4 RNU6-580P-201ENST00000365159 107 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 MIR18B-201ENST00000454574 71 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 AC048334.1-201ENST00000477975 159 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 SNORA25.16-201ENST00000516741 121 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 RNU1-40P-201ENST00000516816 164 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 RNU1-97P-201ENST00000516872 164 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 MIR4491-201ENST00000581087 68 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 MIR548BB-201ENST00000626714 66 ntBASIC2.16□□□□□ -2.06
TRIM50Q86XT4 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNU6-633P-201ENST00000362612 103 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNU6-403P-201ENST00000363163 104 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 Y_RNA.426-201ENST00000384068 113 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNU6-571P-201ENST00000384128 107 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM50Q86XT4 AL161932.1-201ENST00000437408 146 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 snoU13.21-201ENST00000459368 105 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNU6-531P-201ENST00000516694 104 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RN7SKP88-201ENST00000516847 250 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 7SK.8-201ENST00000612110 250 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 7SK.11-201ENST00000615477 250 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 7SK.13-201ENST00000622040 250 ntBASIC2.15□□□□□ -2.07
TRIM50Q86XT4 RNU1-36P-201ENST00000365130 165 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RNU6-53P-201ENST00000365367 106 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RNU6-519P-201ENST00000410590 108 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RNA5SP225-201ENST00000410874 135 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 RPS27P16-201ENST00000425758 201 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 AC023790.1-201ENST00000482174 347 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM50Q86XT4 AC023934.1-201ENST00000574529 2389 ntBASIC2.14□□□□□ -2.07
TRIM50Q86XT4 SNORD115-27-201ENST00000364430 82 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 Y_RNA.437-201ENST00000384113 113 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 MIR1255A-201ENST00000408338 113 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 RNU7-171P-201ENST00000459581 62 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 RNU6-638P-201ENST00000516582 104 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 AC008163.1-202ENST00000636004 2889 ntBASIC2.13□□□□□ -2.07
TRIM50Q86XT4 RNU1-17P-201ENST00000363022 152 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 RNU4-58P-201ENST00000363192 141 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 RNU1-78P-201ENST00000391248 165 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 Y_RNA.588-201ENST00000391254 102 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 SNORD83.1-201ENST00000411362 77 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 SNORA31.2-201ENST00000516019 134 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM50Q86XT4 AC006160.2-201ENST00000637708 154 ntBASIC2.12□□□□□ -2.07
TRIM50Q86XT4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM50Q86XT4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM50Q86XT4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM50Q86XT4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM50Q86XT4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRIM50Q86XT4 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
TRIM50Q86XT4 RNU6-1054P-201ENST00000411293 104 ntBASIC2.11□□□□□ -2.07
TRIM50Q86XT4 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
TRIM50Q86XT4 AC008834.1-201ENST00000511612 175 ntBASIC2.11□□□□□ -2.07
TRIM50Q86XT4 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.11□□□□□ -2.07
TRIM50Q86XT4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM50Q86XT4 RNU6-787P-201ENST00000384032 107 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 SNORA75.2-201ENST00000391138 150 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 SNORA75.3-201ENST00000391231 150 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 MIR1257-201ENST00000408490 117 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 AC015818.7-201ENST00000428754 109 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 AC087499.7-201ENST00000441958 109 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 RNU7-185P-201ENST00000459215 60 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 MIR4422-201ENST00000581938 83 ntBASIC2.1□□□□□ -2.07
TRIM50Q86XT4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM50Q86XT4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM50Q86XT4 SNORD113.3-201ENST00000364630 78 ntBASIC2.09□□□□□ -2.07
TRIM50Q86XT4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.09□□□□□ -2.07
TRIM50Q86XT4 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.07
TRIM50Q86XT4 MIR516A2-201ENST00000384888 90 ntBASIC2.08□□□□□ -2.08
TRIM50Q86XT4 MIR516A1-201ENST00000385033 90 ntBASIC2.08□□□□□ -2.08
TRIM50Q86XT4 MIR519C-201ENST00000385053 87 ntBASIC2.08□□□□□ -2.08
TRIM50Q86XT4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.08□□□□□ -2.08
TRIM50Q86XT4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRIM50Q86XT4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM50Q86XT4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM50Q86XT4 Y_RNA.313-201ENST00000365095 103 ntBASIC2.07□□□□□ -2.08
TRIM50Q86XT4 RNU6-934P-201ENST00000365154 107 ntBASIC2.07□□□□□ -2.08
TRIM50Q86XT4 SNORA17.3-201ENST00000391159 129 ntBASIC2.07□□□□□ -2.08
TRIM50Q86XT4 MIR934-201ENST00000401241 83 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms