Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VARS2Q5ST30 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VARS2Q5ST30 RNU6-35P-201ENST00000384530 107 ntBASIC3.02□□□□□ -1.93
VARS2Q5ST30 AC008413.1-201ENST00000511864 177 ntBASIC3.02□□□□□ -1.93
VARS2Q5ST30 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
VARS2Q5ST30 MIR3192-201ENST00000584920 77 ntBASIC3.02□□□□□ -1.93
VARS2Q5ST30 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.02□□□□□ -1.93
VARS2Q5ST30 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.02□□□□□ -1.93
VARS2Q5ST30 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VARS2Q5ST30 RNU6-495P-201ENST00000362995 107 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 RNU6-302P-201ENST00000365249 107 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 HMGN2P3-201ENST00000433603 273 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 HMGN2P5-201ENST00000436882 273 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 MIR2115-201ENST00000516657 100 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
VARS2Q5ST30 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VARS2Q5ST30 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VARS2Q5ST30 RNU6-520P-201ENST00000384717 104 ntBASIC3□□□□□ -1.93
VARS2Q5ST30 AL359511.1-201ENST00000402970 211 ntBASIC3□□□□□ -1.93
VARS2Q5ST30 MIR203A-201ENST00000384836 110 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
VARS2Q5ST30 AL513328.1-201ENST00000446460 224 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 MIR18B-201ENST00000454574 71 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 SNORD109B-201ENST00000458961 67 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 SNORD109A-201ENST00000459128 67 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
VARS2Q5ST30 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VARS2Q5ST30 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VARS2Q5ST30 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VARS2Q5ST30 MIR377-201ENST00000362145 69 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 SNORD21-201ENST00000383953 95 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 RNA5SP465-201ENST00000391195 109 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 AL138827.1-201ENST00000402666 306 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 RNU6-287P-201ENST00000516230 98 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 RNU6-1089P-201ENST00000516473 104 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.98□□□□□ -1.93
VARS2Q5ST30 MIR6082-201ENST00000613604 109 ntBASIC2.98□□□□□ -1.93
VARS2Q5ST30 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.98□□□□□ -1.93
VARS2Q5ST30 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
VARS2Q5ST30 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
VARS2Q5ST30 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 MIR512-1-201ENST00000384913 84 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 RNU6-930P-201ENST00000390938 100 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.97□□□□□ -1.93
VARS2Q5ST30 AC138907.6-201ENST00000568401 126 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 AC138869.1-201ENST00000568623 124 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 NAMPTP3-201ENST00000569273 224 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 MIR3657-201ENST00000584818 117 ntBASIC2.97□□□□□ -1.93
VARS2Q5ST30 RN7SL274P-201ENST00000492268 272 ntBASIC2.96□□□□□ -1.94
VARS2Q5ST30 RNA5SP24-201ENST00000516478 95 ntBASIC2.96□□□□□ -1.94
VARS2Q5ST30 RNU6-902P-201ENST00000517212 91 ntBASIC2.96□□□□□ -1.94
VARS2Q5ST30 SNRPGP19-201ENST00000603826 189 ntBASIC2.96□□□□□ -1.94
VARS2Q5ST30 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VARS2Q5ST30 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VARS2Q5ST30 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARS2Q5ST30 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.95□□□□□ -1.94
VARS2Q5ST30 Y_RNA.13-201ENST00000362403 112 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 U8.2-201ENST00000363156 134 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARS2Q5ST30 MIR9-1-201ENST00000385198 89 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 RNA5SP21-201ENST00000410917 96 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.95□□□□□ -1.94
VARS2Q5ST30 snoU13.15-201ENST00000459407 104 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 RN7SL499P-201ENST00000481141 276 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 RNU6-656P-201ENST00000516785 107 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 DEFB122-202ENST00000569013 197 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 SNORD53-201ENST00000579969 78 ntBASIC2.95□□□□□ -1.94
VARS2Q5ST30 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARS2Q5ST30 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
VARS2Q5ST30 MIR7-2-201ENST00000384970 110 ntBASIC2.94□□□□□ -1.94
VARS2Q5ST30 SNORD41-201ENST00000386967 70 ntBASIC2.94□□□□□ -1.94
VARS2Q5ST30 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
VARS2Q5ST30 RNU6-765P-201ENST00000516916 99 ntBASIC2.94□□□□□ -1.94
VARS2Q5ST30 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.94□□□□□ -1.94
VARS2Q5ST30 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VARS2Q5ST30 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
VARS2Q5ST30 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
VARS2Q5ST30 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VARS2Q5ST30 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VARS2Q5ST30 MIR548F3-201ENST00000408509 87 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 RNA5SP501-201ENST00000410990 112 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 RNA5SP492-201ENST00000411330 114 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 Y_RNA.676-201ENST00000516393 96 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 MIR3126-201ENST00000577443 74 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 MIR6516-201ENST00000630554 81 ntBASIC2.93□□□□□ -1.94
VARS2Q5ST30 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.93□□□□□ -1.94
VARS2Q5ST30 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VARS2Q5ST30 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.93□□□□□ -1.94
VARS2Q5ST30 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
VARS2Q5ST30 RNU6-580P-201ENST00000365159 107 ntBASIC2.92□□□□□ -1.94
VARS2Q5ST30 SNORD115-44-201ENST00000365391 82 ntBASIC2.92□□□□□ -1.94
VARS2Q5ST30 RNU6-203P-201ENST00000384038 104 ntBASIC2.92□□□□□ -1.94
VARS2Q5ST30 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
VARS2Q5ST30 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.92□□□□□ -1.94
VARS2Q5ST30 MIR548V-201ENST00000584165 80 ntBASIC2.92□□□□□ -1.94
VARS2Q5ST30 AC003982.1-202ENST00000469928 248 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms