Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 MIR5582-201ENST00000579697 68 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 AL442128.1-201ENST00000615151 90 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 AP001362.1-201ENST00000625165 124 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 U6.109-201ENST00000636749 87 ntBASIC1.39□□□□□ -2.19
IRF9Q00978 RNU1-36P-201ENST00000365130 165 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 RPS29P28-201ENST00000446439 141 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 RNU6-109P-201ENST00000516364 107 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 RNU6-184P-201ENST00000516514 107 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 AC138749.4-201ENST00000563970 127 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 MIR4679-1-201ENST00000637619 75 ntBASIC1.38□□□□□ -2.19
IRF9Q00978 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
IRF9Q00978 Y_RNA.10-201ENST00000362371 110 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 RNA5SP133-201ENST00000363368 119 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
IRF9Q00978 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
IRF9Q00978 RNY4P30-201ENST00000410216 95 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 AC015818.7-201ENST00000428754 109 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 AC087499.7-201ENST00000441958 109 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 MIR4498-201ENST00000577599 66 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
IRF9Q00978 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
IRF9Q00978 Y_RNA.588-201ENST00000391254 102 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 RNU6-1006P-201ENST00000516998 103 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 MIR4491-201ENST00000581087 68 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 AC096720.1-201ENST00000604441 183 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
IRF9Q00978 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
IRF9Q00978 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
IRF9Q00978 SNORD38.1-201ENST00000363863 68 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 Y_RNA.544-201ENST00000384650 113 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 Y_RNA.601-201ENST00000410500 113 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 AC067940.1-201ENST00000458411 300 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 AC020891.4-201ENST00000605745 93 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 Y_RNA.818-201ENST00000618813 71 ntBASIC1.35□□□□□ -2.19
IRF9Q00978 RNU6-403P-201ENST00000363163 104 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 SNORD38.2-201ENST00000384470 69 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 RNU4-83P-201ENST00000410863 133 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 RNU6-1053P-201ENST00000515930 101 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 SNORA40.13-201ENST00000516379 120 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 AC006254.2-201ENST00000603259 279 ntBASIC1.34□□□□□ -2.19
IRF9Q00978 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
IRF9Q00978 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 Y_RNA.247-201ENST00000364500 92 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 Y_RNA.369-201ENST00000365568 117 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 MIR125B2-201ENST00000385128 89 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 SCARNA23-201ENST00000516060 130 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 RNU1-92P-201ENST00000517017 135 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 MIR4676-201ENST00000583078 72 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
IRF9Q00978 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.33□□□□□ -2.2
IRF9Q00978 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
IRF9Q00978 RNU6-369P-201ENST00000362515 102 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 Y_RNA.119-201ENST00000363301 96 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 SNORD45B-201ENST00000364617 72 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 RNU6-1131P-201ENST00000364955 107 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 MIR488-201ENST00000365739 83 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 SNORA72.6-201ENST00000384520 129 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 MTATP8P2-201ENST00000435212 202 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 Y_RNA.659-201ENST00000515994 113 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
IRF9Q00978 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
IRF9Q00978 MIR1-1-201ENST00000362147 71 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 Y_RNA.4-201ENST00000362333 112 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 RNU6-49P-201ENST00000384256 107 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 SNORA25.16-201ENST00000516741 121 ntBASIC1.31□□□□□ -2.2
IRF9Q00978 HSBP1P2-201ENST00000299671 229 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 RNU4-58P-201ENST00000363192 141 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 MIR1827-201ENST00000408549 66 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 RNU6-977P-201ENST00000516411 103 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 RNU6-531P-201ENST00000516694 104 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 RNU6-158P-201ENST00000517104 100 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 MIR4500-201ENST00000579472 76 ntBASIC1.3□□□□□ -2.2
IRF9Q00978 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 Y_RNA.13-201ENST00000362403 112 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 Y_RNA.93-201ENST00000363066 109 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 Y_RNA.107-201ENST00000363190 121 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 Y_RNA.466-201ENST00000384294 113 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
IRF9Q00978 MIR548G-201ENST00000408442 89 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 292.4 ms