Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC133485.1-201ENST00000567176 124 ntBASIC1.25□□□□□ -2.21
THBS3P49746 RNU6-90P-201ENST00000606352 106 ntBASIC1.25□□□□□ -2.21
THBS3P49746 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
THBS3P49746 Y_RNA.4-201ENST00000362333 112 ntBASIC1.24□□□□□ -2.21
THBS3P49746 Y_RNA.173-201ENST00000363776 113 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RNU6-219P-201ENST00000364728 107 ntBASIC1.24□□□□□ -2.21
THBS3P49746 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RNU6-675P-201ENST00000384236 104 ntBASIC1.24□□□□□ -2.21
THBS3P49746 SNORD116-22-201ENST00000384430 92 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RNA5SP95-201ENST00000410319 137 ntBASIC1.24□□□□□ -2.21
THBS3P49746 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
THBS3P49746 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
THBS3P49746 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
THBS3P49746 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
THBS3P49746 MIR4668-201ENST00000582284 70 ntBASIC1.24□□□□□ -2.21
THBS3P49746 MIR4264-201ENST00000583520 66 ntBASIC1.24□□□□□ -2.21
THBS3P49746 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
THBS3P49746 IGLL4P-201ENST00000614590 133 ntBASIC1.24□□□□□ -2.21
THBS3P49746 AC012676.2-201ENST00000619258 186 ntBASIC1.24□□□□□ -2.21
THBS3P49746 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
THBS3P49746 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
THBS3P49746 MIR30D-201ENST00000362283 70 ntBASIC1.23□□□□□ -2.21
THBS3P49746 RNU6-1165P-201ENST00000410119 107 ntBASIC1.23□□□□□ -2.21
THBS3P49746 RNU7-62P-201ENST00000458856 62 ntBASIC1.23□□□□□ -2.21
THBS3P49746 MIR2115-201ENST00000516657 100 ntBASIC1.23□□□□□ -2.21
THBS3P49746 AP003327.1-201ENST00000529684 127 ntBASIC1.23□□□□□ -2.21
THBS3P49746 AC138749.4-201ENST00000563970 127 ntBASIC1.23□□□□□ -2.21
THBS3P49746 AC090897.1-201ENST00000580909 226 ntBASIC1.23□□□□□ -2.21
THBS3P49746 AP000753.3-201ENST00000604083 169 ntBASIC1.23□□□□□ -2.21
THBS3P49746 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.23□□□□□ -2.21
THBS3P49746 RNU1-42P-201ENST00000364033 160 ntBASIC1.22□□□□□ -2.21
THBS3P49746 RNY1P2-201ENST00000364820 117 ntBASIC1.22□□□□□ -2.21
THBS3P49746 RNU6-497P-201ENST00000365316 104 ntBASIC1.22□□□□□ -2.21
THBS3P49746 SNORD38.2-201ENST00000384470 69 ntBASIC1.22□□□□□ -2.21
THBS3P49746 SNORA2B-201ENST00000384583 137 ntBASIC1.22□□□□□ -2.21
THBS3P49746 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
THBS3P49746 MIR30A-201ENST00000385092 71 ntBASIC1.22□□□□□ -2.21
THBS3P49746 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
THBS3P49746 MT-TN-201ENST00000387400 73 ntBASIC1.22□□□□□ -2.21
THBS3P49746 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
THBS3P49746 RNU6-1275P-201ENST00000391087 107 ntBASIC1.22□□□□□ -2.21
THBS3P49746 Y_RNA.620-201ENST00000411009 88 ntBASIC1.22□□□□□ -2.21
THBS3P49746 AC245517.4-201ENST00000448601 281 ntBASIC1.22□□□□□ -2.21
THBS3P49746 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
THBS3P49746 MIR3198-2-201ENST00000577868 80 ntBASIC1.22□□□□□ -2.21
THBS3P49746 SNORA4-201ENST00000584302 138 ntBASIC1.22□□□□□ -2.21
THBS3P49746 U6.109-201ENST00000636749 87 ntBASIC1.22□□□□□ -2.21
THBS3P49746 HSBP1P2-201ENST00000299671 229 ntBASIC1.21□□□□□ -2.22
THBS3P49746 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
THBS3P49746 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
THBS3P49746 Y_RNA.168-201ENST00000363740 102 ntBASIC1.21□□□□□ -2.22
THBS3P49746 MIR181B2-201ENST00000385004 89 ntBASIC1.21□□□□□ -2.22
THBS3P49746 SNORA67.6-201ENST00000391093 99 ntBASIC1.21□□□□□ -2.22
THBS3P49746 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
THBS3P49746 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
THBS3P49746 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
THBS3P49746 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
THBS3P49746 AL513043.2-201ENST00000573941 143 ntBASIC1.21□□□□□ -2.22
THBS3P49746 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
THBS3P49746 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
THBS3P49746 AC025521.1-201ENST00000621624 286 ntBASIC1.21□□□□□ -2.22
THBS3P49746 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
THBS3P49746 RNA5SP133-201ENST00000363368 119 ntBASIC1.2□□□□□ -2.22
THBS3P49746 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
THBS3P49746 Y_RNA.219-201ENST00000364232 113 ntBASIC1.2□□□□□ -2.22
THBS3P49746 RNU6-613P-201ENST00000410412 108 ntBASIC1.2□□□□□ -2.22
THBS3P49746 Y_RNA.609-201ENST00000410669 89 ntBASIC1.2□□□□□ -2.22
THBS3P49746 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
THBS3P49746 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
THBS3P49746 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.2□□□□□ -2.22
THBS3P49746 MIR4500-201ENST00000579472 76 ntBASIC1.2□□□□□ -2.22
THBS3P49746 MIR4781-201ENST00000585250 76 ntBASIC1.2□□□□□ -2.22
THBS3P49746 AL645939.4-201ENST00000604495 135 ntBASIC1.2□□□□□ -2.22
THBS3P49746 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
THBS3P49746 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
THBS3P49746 RNU6-228P-201ENST00000362700 106 ntBASIC1.19□□□□□ -2.22
THBS3P49746 SNORD78.1-201ENST00000390866 65 ntBASIC1.19□□□□□ -2.22
THBS3P49746 MIR1323-201ENST00000408090 73 ntBASIC1.19□□□□□ -2.22
THBS3P49746 RNU4-83P-201ENST00000410863 133 ntBASIC1.19□□□□□ -2.22
THBS3P49746 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
THBS3P49746 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
THBS3P49746 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
THBS3P49746 MIR5588-201ENST00000581890 63 ntBASIC1.19□□□□□ -2.22
THBS3P49746 AL359821.1-201ENST00000605519 182 ntBASIC1.19□□□□□ -2.22
THBS3P49746 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
THBS3P49746 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
THBS3P49746 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
THBS3P49746 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
THBS3P49746 Y_RNA.119-201ENST00000363301 96 ntBASIC1.18□□□□□ -2.22
THBS3P49746 RNU6-1276P-201ENST00000365372 104 ntBASIC1.18□□□□□ -2.22
THBS3P49746 RNU6-979P-201ENST00000383896 107 ntBASIC1.18□□□□□ -2.22
THBS3P49746 RNU6-1124P-201ENST00000384169 107 ntBASIC1.18□□□□□ -2.22
THBS3P49746 MT-TF-201ENST00000387314 71 ntBASIC1.18□□□□□ -2.22
THBS3P49746 MIR1287-201ENST00000408492 90 ntBASIC1.18□□□□□ -2.22
THBS3P49746 BX276092.1-201ENST00000427368 251 ntBASIC1.18□□□□□ -2.22
THBS3P49746 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
THBS3P49746 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
THBS3P49746 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms