Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
GDNFP39905 RNU6-1108P-201ENST00000516308 104 ntBASIC1.84□□□□□ -2.11
GDNFP39905 SNORA18.5-201ENST00000516616 101 ntBASIC1.84□□□□□ -2.11
GDNFP39905 RNU6-557P-201ENST00000516842 110 ntBASIC1.84□□□□□ -2.11
GDNFP39905 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
GDNFP39905 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
GDNFP39905 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
GDNFP39905 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GDNFP39905 Y_RNA.283-201ENST00000364798 112 ntBASIC1.83□□□□□ -2.12
GDNFP39905 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
GDNFP39905 SNORD93-201ENST00000408813 74 ntBASIC1.83□□□□□ -2.12
GDNFP39905 RNU6-75P-201ENST00000515944 104 ntBASIC1.83□□□□□ -2.12
GDNFP39905 MIR3945-201ENST00000581853 98 ntBASIC1.83□□□□□ -2.12
GDNFP39905 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
GDNFP39905 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
GDNFP39905 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.82□□□□□ -2.12
GDNFP39905 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GDNFP39905 MIR103A2-201ENST00000362154 78 ntBASIC1.82□□□□□ -2.12
GDNFP39905 RNU4-53P-201ENST00000410828 140 ntBASIC1.82□□□□□ -2.12
GDNFP39905 AL133373.1-201ENST00000497098 94 ntBASIC1.82□□□□□ -2.12
GDNFP39905 AP003716.2-201ENST00000528260 108 ntBASIC1.82□□□□□ -2.12
GDNFP39905 MIR3064-201ENST00000581130 66 ntBASIC1.82□□□□□ -2.12
GDNFP39905 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GDNFP39905 MIRLET7F1-201ENST00000362202 87 ntBASIC1.81□□□□□ -2.12
GDNFP39905 RNU6-403P-201ENST00000363163 104 ntBASIC1.81□□□□□ -2.12
GDNFP39905 RNU4-58P-201ENST00000363192 141 ntBASIC1.81□□□□□ -2.12
GDNFP39905 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
GDNFP39905 Y_RNA.588-201ENST00000391254 102 ntBASIC1.81□□□□□ -2.12
GDNFP39905 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
GDNFP39905 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.81□□□□□ -2.12
GDNFP39905 RNU6-523P-201ENST00000516304 54 ntBASIC1.81□□□□□ -2.12
GDNFP39905 RNA5SP200-201ENST00000516360 103 ntBASIC1.81□□□□□ -2.12
GDNFP39905 MIR3134-201ENST00000579433 74 ntBASIC1.81□□□□□ -2.12
GDNFP39905 AC104996.3-201ENST00000590718 94 ntBASIC1.81□□□□□ -2.12
GDNFP39905 MIR6132-201ENST00000622083 109 ntBASIC1.81□□□□□ -2.12
GDNFP39905 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
GDNFP39905 RNA5SP264-201ENST00000363115 107 ntBASIC1.8□□□□□ -2.12
GDNFP39905 RNU6-957P-201ENST00000363652 99 ntBASIC1.8□□□□□ -2.12
GDNFP39905 RNU6-53P-201ENST00000365367 106 ntBASIC1.8□□□□□ -2.12
GDNFP39905 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
GDNFP39905 Y_RNA.491-201ENST00000384417 107 ntBASIC1.8□□□□□ -2.12
GDNFP39905 U8.13-201ENST00000390842 128 ntBASIC1.8□□□□□ -2.12
GDNFP39905 RNU6-466P-201ENST00000391224 103 ntBASIC1.8□□□□□ -2.12
GDNFP39905 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
GDNFP39905 AL356320.1-201ENST00000429616 163 ntBASIC1.8□□□□□ -2.12
GDNFP39905 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
GDNFP39905 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
GDNFP39905 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
GDNFP39905 MIR8063-201ENST00000621930 81 ntBASIC1.8□□□□□ -2.12
GDNFP39905 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
GDNFP39905 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
GDNFP39905 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GDNFP39905 RNU1-36P-201ENST00000365130 165 ntBASIC1.79□□□□□ -2.12
GDNFP39905 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
GDNFP39905 RNU6-380P-201ENST00000410207 107 ntBASIC1.79□□□□□ -2.12
GDNFP39905 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
GDNFP39905 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
GDNFP39905 FGF7P7-201ENST00000514120 227 ntBASIC1.79□□□□□ -2.12
GDNFP39905 MIR4484-201ENST00000582855 83 ntBASIC1.79□□□□□ -2.12
GDNFP39905 SNORD92-201ENST00000585078 85 ntBASIC1.79□□□□□ -2.12
GDNFP39905 MIR377-201ENST00000362145 69 ntBASIC1.78□□□□□ -2.12
GDNFP39905 SNORA25.9-201ENST00000365087 128 ntBASIC1.78□□□□□ -2.12
GDNFP39905 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
GDNFP39905 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
GDNFP39905 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
GDNFP39905 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
GDNFP39905 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
GDNFP39905 RNU6-580P-201ENST00000365159 107 ntBASIC1.77□□□□□ -2.13
GDNFP39905 Y_RNA.532-201ENST00000384590 113 ntBASIC1.77□□□□□ -2.13
GDNFP39905 MIR635-201ENST00000384830 98 ntBASIC1.77□□□□□ -2.13
GDNFP39905 MIR548U-201ENST00000390728 81 ntBASIC1.77□□□□□ -2.13
GDNFP39905 SNORD90-201ENST00000391145 111 ntBASIC1.77□□□□□ -2.13
GDNFP39905 MIR18B-201ENST00000454574 71 ntBASIC1.77□□□□□ -2.13
GDNFP39905 snoU13.21-201ENST00000459368 105 ntBASIC1.77□□□□□ -2.13
GDNFP39905 TRAJ51-201ENST00000504127 63 ntBASIC1.77□□□□□ -2.13
GDNFP39905 Y_RNA.660-201ENST00000516002 120 ntBASIC1.77□□□□□ -2.13
GDNFP39905 AC013244.2-201ENST00000603396 103 ntBASIC1.77□□□□□ -2.13
GDNFP39905 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
GDNFP39905 MIR101-2-201ENST00000362195 79 ntBASIC1.76□□□□□ -2.13
GDNFP39905 SNORD77.2-201ENST00000391045 68 ntBASIC1.76□□□□□ -2.13
GDNFP39905 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GDNFP39905 SNORA3.2-201ENST00000408221 125 ntBASIC1.76□□□□□ -2.13
GDNFP39905 SNORD100-201ENST00000408573 76 ntBASIC1.76□□□□□ -2.13
GDNFP39905 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
GDNFP39905 RNU7-195P-201ENST00000458793 62 ntBASIC1.76□□□□□ -2.13
GDNFP39905 AC114801.3-201ENST00000510231 177 ntBASIC1.76□□□□□ -2.13
GDNFP39905 RNU6-1194P-201ENST00000516208 104 ntBASIC1.76□□□□□ -2.13
GDNFP39905 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
GDNFP39905 MIR4713-201ENST00000582691 75 ntBASIC1.76□□□□□ -2.13
GDNFP39905 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.76□□□□□ -2.13
GDNFP39905 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.76□□□□□ -2.13
GDNFP39905 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GDNFP39905 AC023934.1-201ENST00000574529 2389 ntBASIC1.76□□□□□ -2.13
GDNFP39905 U8.2-201ENST00000363156 134 ntBASIC1.75□□□□□ -2.13
GDNFP39905 Y_RNA.536-201ENST00000384621 113 ntBASIC1.75□□□□□ -2.13
GDNFP39905 AC015818.7-201ENST00000428754 109 ntBASIC1.75□□□□□ -2.13
GDNFP39905 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
GDNFP39905 MIR6873-201ENST00000622788 63 ntBASIC1.75□□□□□ -2.13
GDNFP39905 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.75□□□□□ -2.13
GDNFP39905 SNORA67.3-201ENST00000384366 140 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 758.2 ms