Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR548AM-201ENST00000584298 74 ntBASIC-2.75□□□□□ -2.85
CHD1O14646 AC005899.2-201ENST00000584353 90 ntBASIC-2.75□□□□□ -2.85
CHD1O14646 RNU6-306P-201ENST00000384617 107 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 MTND1P34-201ENST00000438556 671 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 FGF7P6-202ENST00000451282 293 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 RNU6-841P-201ENST00000383872 107 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 SNORA32-201ENST00000384072 121 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 Y_RNA.570-201ENST00000384750 101 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 SNORD78.2-201ENST00000391076 69 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 RNU6-248P-201ENST00000410720 107 ntBASIC-2.76□□□□□ -2.85
CHD1O14646 FGF7P2-201ENST00000332473 296 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 SNORD36A-201ENST00000362874 73 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 Y_RNA.372-201ENST00000365599 102 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 RNU6-80P-201ENST00000384195 107 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 RNU6-21P-201ENST00000384710 107 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 MIR206-201ENST00000384872 86 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 MIR4659A-201ENST00000580269 81 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 AC108081.1-201ENST00000604358 221 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 AC097520.1-201ENST00000624435 385 ntBASIC-2.77□□□□□ -2.85
CHD1O14646 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.78□□□□□ -2.85
CHD1O14646 RNU4-88P-201ENST00000411220 86 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 RNA5SP153-201ENST00000516498 76 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 MIR466-201ENST00000580653 84 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 MIR3129-201ENST00000581095 76 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 MIR5197-201ENST00000583721 112 ntBASIC-2.78□□□□□ -2.85
CHD1O14646 MTATP6P19-201ENST00000413797 659 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 RNU6-850P-201ENST00000516934 103 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 MIR4748-201ENST00000578076 82 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 MIR3145-201ENST00000580727 82 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 MIR6128-201ENST00000615528 109 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 Y_RNA.530-201ENST00000384587 101 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 SNRPGP8-201ENST00000454064 226 ntBASIC-2.79□□□□□ -2.86
CHD1O14646 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 RNU6-728P-201ENST00000365375 104 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 SNORD42B-201ENST00000458893 67 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 FGF7P4-201ENST00000509595 295 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 MTND3P12-201ENST00000559068 328 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 AC005014.2-201ENST00000607795 599 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 TRDV1-202ENST00000621643 102 ntBASIC-2.8□□□□□ -2.86
CHD1O14646 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 MIR1244-1-201ENST00000612829 85 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 AC007485.1-201ENST00000616755 206 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 MIR1244-3-201ENST00000635744 85 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 MIR1244-2-201ENST00000636449 85 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 MIR1244-4-202ENST00000636813 85 ntBASIC-2.81□□□□□ -2.86
CHD1O14646 RNU6-99P-201ENST00000364721 107 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 MIR514A2-201ENST00000385131 88 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 MIR514A3-201ENST00000385132 88 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 U3.27-201ENST00000391237 200 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 RNY1P6-201ENST00000384193 109 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 MIR181A1-201ENST00000385026 110 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-2.82□□□□□ -2.86
CHD1O14646 RNA5SP144-201ENST00000410846 116 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 AL353193.1-201ENST00000421444 268 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 SEPT14P4-201ENST00000513445 186 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 RNU6-566P-201ENST00000516790 107 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 AC133104.2-201ENST00000615272 193 ntBASIC-2.82□□□□□ -2.86
CHD1O14646 SNORD27-201ENST00000363981 72 ntBASIC-2.83□□□□□ -2.86
CHD1O14646 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.83□□□□□ -2.86
CHD1O14646 AC090616.4-201ENST00000448026 115 ntBASIC-2.83□□□□□ -2.86
CHD1O14646 DEFB117-201ENST00000602356 141 ntBASIC-2.83□□□□□ -2.86
CHD1O14646 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.84□□□□□ -2.86
CHD1O14646 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.84□□□□□ -2.86
CHD1O14646 AC097639.2-201ENST00000603159 172 ntBASIC-2.84□□□□□ -2.86
CHD1O14646 U6.96-201ENST00000636425 70 ntBASIC-2.84□□□□□ -2.86
CHD1O14646 TPTEP1-208ENST00000636884 213 ntBASIC-2.84□□□□□ -2.86
CHD1O14646 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.85□□□□□ -2.86
CHD1O14646 MTND2P14-201ENST00000482139 351 ntBASIC-2.85□□□□□ -2.86
CHD1O14646 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.85□□□□□ -2.86
CHD1O14646 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.85□□□□□ -2.86
CHD1O14646 AC090617.8-201ENST00000623339 167 ntBASIC-2.85□□□□□ -2.86
CHD1O14646 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.85□□□□□ -2.87
CHD1O14646 RNU4-10P-201ENST00000364383 140 ntBASIC-2.86□□□□□ -2.87
CHD1O14646 SNORA63.6-201ENST00000364921 119 ntBASIC-2.86□□□□□ -2.87
CHD1O14646 RNY3P10-201ENST00000384764 102 ntBASIC-2.86□□□□□ -2.87
CHD1O14646 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-2.86□□□□□ -2.87
CHD1O14646 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.86□□□□□ -2.87
CHD1O14646 RNU6-911P-201ENST00000516523 104 ntBASIC-2.86□□□□□ -2.87
CHD1O14646 RNU6-332P-201ENST00000391193 108 ntBASIC-2.87□□□□□ -2.87
CHD1O14646 AL161932.1-201ENST00000437408 146 ntBASIC-2.87□□□□□ -2.87
CHD1O14646 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.87□□□□□ -2.87
CHD1O14646 RPS29P25-201ENST00000481709 171 ntBASIC-2.87□□□□□ -2.87
CHD1O14646 MIR4790-201ENST00000577799 79 ntBASIC-2.87□□□□□ -2.87
CHD1O14646 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 RNU7-66P-201ENST00000459469 62 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 RNU6-764P-201ENST00000516396 105 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 AP002795.1-201ENST00000534879 84 ntBASIC-2.88□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 536 ms