Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RPS27P21-201ENST00000486977 252 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RNU1-40P-201ENST00000516816 164 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 RNU1-97P-201ENST00000516872 164 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 AC026421.1-201ENST00000519101 163 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 MIR548Z-201ENST00000584743 97 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 AL627230.6-201ENST00000611129 280 ntBASIC1.79□□□□□ -2.12
SIT1Q9Y3P8 Y_RNA.98-201ENST00000363109 102 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNU6-865P-201ENST00000364772 107 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNU6-949P-201ENST00000384040 107 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 MIR34C-201ENST00000384831 77 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNA5SP237-201ENST00000410414 113 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNU6-887P-201ENST00000410660 100 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNU7-48P-201ENST00000458875 63 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 MIR2115-201ENST00000516657 100 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 RNU6-762P-201ENST00000517107 102 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 MIR6504-201ENST00000613520 61 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 U7.3-201ENST00000616123 62 ntBASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SIT1Q9Y3P8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 Y_RNA.247-201ENST00000364500 92 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 SNORA26.2-201ENST00000390922 122 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 MIR1276-201ENST00000408707 83 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 RNY4P29-201ENST00000410801 97 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 RPL30P7-201ENST00000479312 323 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 SNORA4-201ENST00000584302 138 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 MIR376B-201ENST00000614515 100 ntBASIC1.77□□□□□ -2.13
SIT1Q9Y3P8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 MIR377-201ENST00000362145 69 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 RNU6-813P-201ENST00000384691 107 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 MIR3198-2-201ENST00000577868 80 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 AP001362.1-201ENST00000625165 124 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
SIT1Q9Y3P8 AL359851.1-201ENST00000569460 4997 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 RNU6-1163P-201ENST00000364516 107 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 RNU6-392P-201ENST00000364926 101 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 RNU6-820P-201ENST00000384273 107 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 Y_RNA.467-201ENST00000384297 102 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 MIR450A2-201ENST00000385022 100 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 AC027119.1-201ENST00000440877 241 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 RPS29P28-201ENST00000446439 141 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 AC109327.2-201ENST00000448339 378 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 AC005908.1-201ENST00000468701 347 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 AP000753.3-201ENST00000604083 169 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 MIR8063-201ENST00000621930 81 ntBASIC1.75□□□□□ -2.13
SIT1Q9Y3P8 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 RNY1P2-201ENST00000364820 117 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 SNORD38.2-201ENST00000384470 69 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 MIR1185-1-201ENST00000408598 86 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 RNU6-613P-201ENST00000410412 108 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 AL096840.1-201ENST00000603287 93 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 AC105081.1-201ENST00000617727 106 ntBASIC1.74□□□□□ -2.13
SIT1Q9Y3P8 HSBP1P2-201ENST00000299671 229 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 MIR30D-201ENST00000362283 70 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 SNORA25.3-201ENST00000363205 127 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 SNORD116-10-201ENST00000363791 102 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 RNU6-580P-201ENST00000365159 107 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 MIR548G-201ENST00000408442 89 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 AC133485.1-201ENST00000567176 124 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 RNU6-90P-201ENST00000606352 106 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 MIR6740-201ENST00000618268 113 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 MIR6516-201ENST00000630554 81 ntBASIC1.73□□□□□ -2.13
SIT1Q9Y3P8 Y_RNA.173-201ENST00000363776 113 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 Y_RNA.388-201ENST00000383919 113 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 HMGN2P38-201ENST00000423806 265 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 MIR514B-201ENST00000516774 80 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 AC062037.1-201ENST00000605302 128 ntBASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
SIT1Q9Y3P8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU6-1244P-201ENST00000363614 108 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU6-1134P-201ENST00000365156 101 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 SNORD58A-201ENST00000383875 65 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 U8.15-201ENST00000390947 134 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 AC090255.1-201ENST00000495779 349 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RNU6-947P-201ENST00000516264 106 ntBASIC1.71□□□□□ -2.14
SIT1Q9Y3P8 RN7SKP12-201ENST00000516275 143 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms