Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC096720.1-201ENST00000604441 183 ntBASIC1.63□□□□□ -2.15
PPARGC1AQ9UBK2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
PPARGC1AQ9UBK2 MIR30D-201ENST00000362283 70 ntBASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-1165P-201ENST00000410119 107 ntBASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 AC108729.3-201ENST00000513484 108 ntBASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 SCARNA23-201ENST00000516060 130 ntBASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 AL442128.1-201ENST00000615151 90 ntBASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-865P-201ENST00000364772 107 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.348-201ENST00000365403 103 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-205P-201ENST00000390858 107 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 AC096949.1-201ENST00000412047 152 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 MIR18B-201ENST00000454574 71 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 RNU7-48P-201ENST00000458875 63 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 SNORA31.2-201ENST00000516019 134 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 SNORA40.13-201ENST00000516379 120 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 AL512310.12-203ENST00000640543 90 ntBASIC1.61□□□□□ -2.15
PPARGC1AQ9UBK2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 RNA5SP99-201ENST00000364020 114 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 SNORD45B-201ENST00000364617 72 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 SNORA19.1-201ENST00000410656 129 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 AC048334.1-201ENST00000477975 159 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 AC133485.1-201ENST00000567176 124 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 MIR4439-201ENST00000583746 80 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.6□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-1298P-201ENST00000362456 101 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.107-201ENST00000363190 121 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-654P-201ENST00000364373 107 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 SNORD38.2-201ENST00000384470 69 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 AC012676.2-201ENST00000619258 186 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 AP001362.1-201ENST00000625165 124 ntBASIC1.59□□□□□ -2.15
PPARGC1AQ9UBK2 SNORD38.1-201ENST00000363863 68 ntBASIC1.58□□□□□ -2.16
PPARGC1AQ9UBK2 RNY1P2-201ENST00000364820 117 ntBASIC1.58□□□□□ -2.16
PPARGC1AQ9UBK2 AL591704.2-201ENST00000421658 181 ntBASIC1.58□□□□□ -2.16
PPARGC1AQ9UBK2 RNA5SP170-201ENST00000517150 101 ntBASIC1.58□□□□□ -2.16
PPARGC1AQ9UBK2 SNORD113.3-201ENST00000364630 78 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-60P-201ENST00000364792 103 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-905P-201ENST00000384434 107 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA80D-201ENST00000384488 135 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 MRPL35P3-201ENST00000421557 364 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-1006P-201ENST00000516998 103 ntBASIC1.57□□□□□ -2.16
PPARGC1AQ9UBK2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 Y_RNA.43-201ENST00000362670 111 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-640P-201ENST00000363693 105 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 SNORD12-201ENST00000391002 90 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 MTATP8P2-201ENST00000435212 202 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 MIR376B-201ENST00000614515 100 ntBASIC1.56□□□□□ -2.16
PPARGC1AQ9UBK2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 MIR34C-201ENST00000384831 77 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA17.3-201ENST00000391159 129 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 SNORD111-201ENST00000408139 94 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 AC004941.2-201ENST00000427009 228 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 RPS29P28-201ENST00000446439 141 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 UBL5P1-201ENST00000507979 193 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-109P-201ENST00000516364 107 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-184P-201ENST00000516514 107 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 AC105081.1-201ENST00000617727 106 ntBASIC1.55□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6-170P-201ENST00000362832 104 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA2B-201ENST00000384583 137 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 RNU7-21P-201ENST00000459430 62 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 AC036111.3-201ENST00000526389 112 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 AC106800.4-201ENST00000614905 153 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 AC008163.1-202ENST00000636004 2889 ntBASIC1.54□□□□□ -2.16
PPARGC1AQ9UBK2 MIR26B-201ENST00000362251 77 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 Y_RNA.95-201ENST00000363079 95 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 U8.15-201ENST00000390947 134 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 RNA5SP95-201ENST00000410319 137 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 SNORD79.1-201ENST00000516069 84 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
PPARGC1AQ9UBK2 HSBP1P2-201ENST00000299671 229 ntBASIC1.52□□□□□ -2.17
PPARGC1AQ9UBK2 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
PPARGC1AQ9UBK2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.52□□□□□ -2.17
PPARGC1AQ9UBK2 RNU6-910P-201ENST00000390844 107 ntBASIC1.52□□□□□ -2.17
PPARGC1AQ9UBK2 RNU7-90P-201ENST00000459216 62 ntBASIC1.52□□□□□ -2.17
PPARGC1AQ9UBK2 uc_338.6-201ENST00000613544 171 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms